STRINGSTRING
sigH_1 sigH_1 sigH_2 sigH_2 sigL sigL cnrH cnrH rpoE_1 rpoE_1 sigG_2 sigG_2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
sigH_1ECF RNA polymerase sigma factor SigH; Belongs to the sigma-70 factor family. ECF subfamily. (203 aa)
sigH_2ECF RNA polymerase sigma factor SigH; Belongs to the sigma-70 factor family. ECF subfamily. (253 aa)
sigLECF RNA polymerase sigma factor SigL; Belongs to the sigma-70 factor family. ECF subfamily. (171 aa)
cnrHRNA polymerase sigma factor CnrH; Belongs to the sigma-70 factor family. ECF subfamily. (189 aa)
rpoE_1ECF RNA polymerase sigma-E factor; Belongs to the sigma-70 factor family. ECF subfamily. (193 aa)
sigG_2ECF RNA polymerase sigma factor SigG; Belongs to the sigma-70 factor family. ECF subfamily. (362 aa)
Your Current Organism:
Mycolicibacterium chlorophenolicum
NCBI taxonomy Id: 37916
Other names: ATCC 49826, CIP 104189, DSM 43826, HAMBI 2278, IEGM 559, IFO 15527, JCM 7439, M. chlorophenolicum, Mycobacterium chlorophenolicum, Mycobacterium chlorophenolicus, Mycobacterium sp. ATCC 25793, NBRC 15527, NRRL B-16528, Rhodococcus chlorophenolicus, Rhodococcus chlorophenolicus (strain PCP-1), strain PCP-1, strain PCP-I
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.