STRINGSTRING
AMM32154.1 AMM32154.1 AMM32157.1 AMM32157.1 AMM32170.1 AMM32170.1 AMM33209.1 AMM33209.1 AMM33271.1 AMM33271.1 AMM33272.1 AMM33272.1 AMM33273.1 AMM33273.1 AMM33276.1 AMM33276.1 AMM33544.1 AMM33544.1 AMM33553.1 AMM33553.1 AMM33854.1 AMM33854.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AMM32154.1Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase family protein; Pfam:pfam02397 Bacterial sugar transferase. (512 aa)
AMM32157.1Pfam:pfam01041 DegT/DnrJ/EryC1/StrS aminotransferase family; Belongs to the DegT/DnrJ/EryC1 family. (382 aa)
AMM32170.1Exopolysaccharide biosynthesis protein, WecB/TagA/CpsF family; Pfam:pfam03808 Glycosyl transferase WecB/TagA/CpsF family. (886 aa)
AMM33209.1UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase; Pfam:pfam02719 Polysaccharide biosynthesis protein. (619 aa)
AMM33271.1dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose. (482 aa)
AMM33272.1dTDP-glucose 4,6-dehydratase; Pfam:pfam01370 NAD dependent epimerase/dehydratase family; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. (331 aa)
AMM33273.1Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family. (291 aa)
AMM33276.1Hypothetical protein; Pfam:pfam01943 Polysaccharide biosynthesis protein. (474 aa)
AMM33544.1Hypothetical protein; Pfam:pfam00534 Glycosyl transferases group 1. (408 aa)
AMM33553.1Putative glucosyltransferase; Pfam:pfam02397 Bacterial sugar transferase. (489 aa)
AMM33854.1Lipopolysaccharide biosynthesis protein; Pfam:pfam13614 AAA domain. (598 aa)
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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