STRINGSTRING
AMM31726.1 AMM31726.1 AMM33526.1 AMM33526.1 AMM33911.1 AMM33911.1 AMM33912.1 AMM33912.1 AMM33913.1 AMM33913.1 AMM33914.1 AMM33914.1 AMM33915.1 AMM33915.1 AMM33916.1 AMM33916.1 AMM34212.1 AMM34212.1 AMM34353.1 AMM34353.1 AMM34551.1 AMM34551.1 AMM34552.1 AMM34552.1 AMM34553.1 AMM34553.1 AMM34554.1 AMM34554.1 AMM34556.1 AMM34556.1 AMM34557.1 AMM34557.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AMM31726.1Pfam:pfam03807 NADP oxidoreductase coenzyme F420-dependent. (215 aa)
AMM33526.1Pfam:pfam03807 NADP oxidoreductase coenzyme F420-dependent. (220 aa)
AMM33911.1Hypothetical protein. (118 aa)
AMM33912.1Short-chain dehydrogenase. (259 aa)
AMM33913.1Pfam:pfam03807 NADP oxidoreductase coenzyme F420-dependent. (214 aa)
AMM33914.1Hypothetical protein. (58 aa)
AMM33915.1Hypothetical protein; Pfam:pfam09770 Topoisomerase II-associated protein PAT1. (289 aa)
AMM33916.1Hypothetical protein. (228 aa)
AMM34212.1Hypothetical protein; Pfam:pfam03807 NADP oxidoreductase coenzyme F420-dependent. (214 aa)
AMM34353.1Pfam:pfam03807 NADP oxidoreductase coenzyme F420-dependent. (221 aa)
AMM34551.1Pfam:pfam00106 short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (274 aa)
AMM34552.1Hypothetical protein. (73 aa)
AMM34553.1Hypothetical protein. (259 aa)
AMM34554.1Hypothetical protein; Pfam:pfam02661 Fic/DOC family. (546 aa)
AMM34556.1Pfam:pfam05552 Conserved TM helix. (251 aa)
AMM34557.1Photosystem reaction center subunit H. (171 aa)
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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