STRINGSTRING
AMM30799.1 AMM30799.1 AMM30940.1 AMM30940.1 AMM30941.1 AMM30941.1 AMM30942.1 AMM30942.1 AMM31185.1 AMM31185.1 AMM31209.1 AMM31209.1 AMM31498.1 AMM31498.1 AMM31612.1 AMM31612.1 AMM31697.1 AMM31697.1 AMM31778.1 AMM31778.1 AMM31779.1 AMM31779.1 AMM31780.1 AMM31780.1 AMM31781.1 AMM31781.1 AMM31915.1 AMM31915.1 AMM32011.1 AMM32011.1 AMM32018.1 AMM32018.1 AMM32558.1 AMM32558.1 AMM32703.1 AMM32703.1 AMM32704.1 AMM32704.1 AMM32705.1 AMM32705.1 AMM32706.1 AMM32706.1 arc arc AMM32708.1 AMM32708.1 pup pup prcB prcB prcA prcA pafA pafA AMM32713.1 AMM32713.1 AMM32714.1 AMM32714.1 AMM33291.1 AMM33291.1 AMM33328.1 AMM33328.1 AMM33725.1 AMM33725.1 AMM33937.1 AMM33937.1 AMM33974.1 AMM33974.1 AMM33983.1 AMM33983.1 AMM33984.1 AMM33984.1 AMM34040.1 AMM34040.1 AMM34315.1 AMM34315.1 AMM34730.1 AMM34730.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AMM30799.1ATPase, P-type, HAD superfamily, subfamily IC family protein; Pfam:pfam00122 E1-E2 ATPase. (915 aa)
AMM30940.1Hypothetical protein. (49 aa)
AMM30941.1Hypothetical protein. (49 aa)
AMM30942.1Peptidase S1; Pfam:pfam13365 Trypsin-like peptidase domain. (299 aa)
AMM31185.1Hypothetical protein. (209 aa)
AMM31209.1Protease; Pfam:pfam00082 Subtilase family. (1046 aa)
AMM31498.1Rhs family protein; Pfam:pfam05593 RHS Repeat. (1686 aa)
AMM31612.1Hypothetical protein; Pfam:pfam12796 Ankyrin repeats (3 copies). (238 aa)
AMM31697.1AAA ATPase, central domain protein; Pfam:pfam00004 ATPase family associated with various cellular activities (AAA). (345 aa)
AMM31778.1Hypothetical protein. (233 aa)
AMM31779.1Hypothetical protein. (250 aa)
AMM31780.1Pfam:pfam00005 ABC transporter. (629 aa)
AMM31781.1Pfam:pfam00293 NUDIX domain. (136 aa)
AMM31915.1Amine oxidase; Pfam:pfam01593 Flavin containing amine oxidoreductase. (445 aa)
AMM32011.1Kelch repeat-containing protein. (531 aa)
AMM32018.1DNA/RNA helicase; Pfam:pfam00176 SNF2 family N-terminal domain. (1127 aa)
AMM32558.1Signal transduction histidine kinase LytS. (272 aa)
AMM32703.1Carboxylate--amine ligase; Pfam:pfam09754 PAC2 family. (300 aa)
AMM32704.1Pfam:pfam13419 Haloacid dehalogenase-like hydrolase. (248 aa)
AMM32705.1Pfam:pfam02163 Peptidase family M50; Belongs to the peptidase M50B family. (382 aa)
AMM32706.1SAM-dependent methyltransferase; Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA. (334 aa)
arcATPase AAA; ATPase which is responsible for recognizing, binding, unfolding and translocation of pupylated proteins into the bacterial 20S proteasome core particle. May be essential for opening the gate of the 20S proteasome via an interaction with its C-terminus, thereby allowing substrate entry and access to the site of proteolysis. Thus, the C-termini of the proteasomal ATPase may function like a 'key in a lock' to induce gate opening and therefore regulate proteolysis. (583 aa)
AMM32708.1Pfam:pfam03136 Pup-ligase protein. (545 aa)
pupProkaryotic ubiquitin-like protein Pup; Protein modifier that is covalently attached to lysine residues of substrate proteins, thereby targeting them for proteasomal degradation. The tagging system is termed pupylation. (69 aa)
prcBProteasome subunit beta; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. Belongs to the peptidase T1B family. (269 aa)
prcAProteasome subunit alpha; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. Belongs to the peptidase T1A family. (235 aa)
pafAPup--protein ligase; Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side- chain amino group of a substrate lysine. (458 aa)
AMM32713.1Peptidylprolyl isomerase; Pfam:pfam00254 FKBP-type peptidyl-prolyl cis-trans isomerase. (310 aa)
AMM32714.1Pfam:pfam00254 FKBP-type peptidyl-prolyl cis-trans isomerase. (168 aa)
AMM33291.1Pfam:pfam01580 FtsK/SpoIIIE family. (1364 aa)
AMM33328.1Signal protein PDZ; Pfam:pfam13365 Trypsin-like peptidase domain. (559 aa)
AMM33725.1Ankyrin repeat-containing protein; Pfam:pfam12796 Ankyrin repeats (3 copies). (139 aa)
AMM33937.1Pfam:pfam00850 Histone deacetylase domain. (412 aa)
AMM33974.1Trypsin-like serine protease; Pfam:pfam02674 Colicin V production protein. (390 aa)
AMM33983.1P-type ATPase, translocating; Pfam:pfam00122 E1-E2 ATPase. (908 aa)
AMM33984.1Hypothetical protein. (77 aa)
AMM34040.1Anthranilate synthase; Pfam:pfam13207 AAA domain. (341 aa)
AMM34315.1mRNA 3'-end processing factor; Pfam:pfam10996 Beta-Casp domain. (466 aa)
AMM34730.1ABC transporter substrate-binding protein. (536 aa)
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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