(13 nodes) Acyl-CoA dehydrogenase, N-terminal domain network (Sinomonas atrocyanea)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AMM34215.1	Pfam:pfam00441 Acyl-CoA dehydrogenase, C-terminal domain. (685 aa)
	AMM31175.1	Pfam:pfam00441 Acyl-CoA dehydrogenase, C-terminal domain. (393 aa)
	AMM31191.1	Pfam:pfam08028 Acyl-CoA dehydrogenase, C-terminal domain. (408 aa)
	AMM31236.1	Pfam:pfam00441 Acyl-CoA dehydrogenase, C-terminal domain. (378 aa)
	AMM31274.1	Pfam:pfam00441 Acyl-CoA dehydrogenase, C-terminal domain. (399 aa)
	AMM32304.1	Pfam:pfam00441 Acyl-CoA dehydrogenase, C-terminal domain. (390 aa)
	AMM32686.1	Pfam:pfam01756 Acyl-CoA oxidase. (691 aa)
	AMM32918.1	Pfam:pfam00441 Acyl-CoA dehydrogenase, C-terminal domain. (396 aa)
	AMM32920.1	Putative glutaryl-CoA dehydrogenase; Pfam:pfam02771 Acyl-CoA dehydrogenase, N-terminal domain. (413 aa)
	AMM32925.1	Pfam:pfam02771 Acyl-CoA dehydrogenase, N-terminal domain. (399 aa)
	AMM33746.1	Pfam:pfam00441 Acyl-CoA dehydrogenase, C-terminal domain. (396 aa)
	AMM34050.1	Acyl-coenzyme A oxidase; Pfam:pfam00441 Acyl-CoA dehydrogenase, C-terminal domain. (400 aa)
	AMM34223.1	Pfam:pfam02771 Acyl-CoA dehydrogenase, N-terminal domain. (410 aa)

Your Current Organism:

Sinomonas atrocyanea

NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AMM31175.1	AMM32686.1	SA2016_0479	SA2016_2013	Pfam:pfam00441 Acyl-CoA dehydrogenase, C-terminal domain.	Pfam:pfam01756 Acyl-CoA oxidase.	0.904
AMM31175.1	AMM32918.1	SA2016_0479	SA2016_2249	Pfam:pfam00441 Acyl-CoA dehydrogenase, C-terminal domain.	Pfam:pfam00441 Acyl-CoA dehydrogenase, C-terminal domain.	0.972
AMM31274.1	AMM32686.1	SA2016_0580	SA2016_2013	Pfam:pfam00441 Acyl-CoA dehydrogenase, C-terminal domain.	Pfam:pfam01756 Acyl-CoA oxidase.	0.907
AMM31274.1	AMM32918.1	SA2016_0580	SA2016_2249	Pfam:pfam00441 Acyl-CoA dehydrogenase, C-terminal domain.	Pfam:pfam00441 Acyl-CoA dehydrogenase, C-terminal domain.	0.929
AMM32304.1	AMM32918.1	SA2016_1628	SA2016_2249	Pfam:pfam00441 Acyl-CoA dehydrogenase, C-terminal domain.	Pfam:pfam00441 Acyl-CoA dehydrogenase, C-terminal domain.	0.927
AMM32686.1	AMM31175.1	SA2016_2013	SA2016_0479	Pfam:pfam01756 Acyl-CoA oxidase.	Pfam:pfam00441 Acyl-CoA dehydrogenase, C-terminal domain.	0.904
AMM32686.1	AMM31274.1	SA2016_2013	SA2016_0580	Pfam:pfam01756 Acyl-CoA oxidase.	Pfam:pfam00441 Acyl-CoA dehydrogenase, C-terminal domain.	0.907
AMM32686.1	AMM32918.1	SA2016_2013	SA2016_2249	Pfam:pfam01756 Acyl-CoA oxidase.	Pfam:pfam00441 Acyl-CoA dehydrogenase, C-terminal domain.	0.915
AMM32686.1	AMM32920.1	SA2016_2013	SA2016_2251	Pfam:pfam01756 Acyl-CoA oxidase.	Putative glutaryl-CoA dehydrogenase; Pfam:pfam02771 Acyl-CoA dehydrogenase, N-terminal domain.	0.907
AMM32686.1	AMM32925.1	SA2016_2013	SA2016_2256	Pfam:pfam01756 Acyl-CoA oxidase.	Pfam:pfam02771 Acyl-CoA dehydrogenase, N-terminal domain.	0.911
AMM32686.1	AMM33746.1	SA2016_2013	SA2016_3081	Pfam:pfam01756 Acyl-CoA oxidase.	Pfam:pfam00441 Acyl-CoA dehydrogenase, C-terminal domain.	0.907
AMM32686.1	AMM34050.1	SA2016_2013	SA2016_3389	Pfam:pfam01756 Acyl-CoA oxidase.	Acyl-coenzyme A oxidase; Pfam:pfam00441 Acyl-CoA dehydrogenase, C-terminal domain.	0.906
AMM32686.1	AMM34223.1	SA2016_2013	SA2016_3564	Pfam:pfam01756 Acyl-CoA oxidase.	Pfam:pfam02771 Acyl-CoA dehydrogenase, N-terminal domain.	0.911
AMM32918.1	AMM31175.1	SA2016_2249	SA2016_0479	Pfam:pfam00441 Acyl-CoA dehydrogenase, C-terminal domain.	Pfam:pfam00441 Acyl-CoA dehydrogenase, C-terminal domain.	0.972
AMM32918.1	AMM31274.1	SA2016_2249	SA2016_0580	Pfam:pfam00441 Acyl-CoA dehydrogenase, C-terminal domain.	Pfam:pfam00441 Acyl-CoA dehydrogenase, C-terminal domain.	0.929
AMM32918.1	AMM32304.1	SA2016_2249	SA2016_1628	Pfam:pfam00441 Acyl-CoA dehydrogenase, C-terminal domain.	Pfam:pfam00441 Acyl-CoA dehydrogenase, C-terminal domain.	0.927
AMM32918.1	AMM32686.1	SA2016_2249	SA2016_2013	Pfam:pfam00441 Acyl-CoA dehydrogenase, C-terminal domain.	Pfam:pfam01756 Acyl-CoA oxidase.	0.915
AMM32918.1	AMM32920.1	SA2016_2249	SA2016_2251	Pfam:pfam00441 Acyl-CoA dehydrogenase, C-terminal domain.	Putative glutaryl-CoA dehydrogenase; Pfam:pfam02771 Acyl-CoA dehydrogenase, N-terminal domain.	0.962
AMM32918.1	AMM32925.1	SA2016_2249	SA2016_2256	Pfam:pfam00441 Acyl-CoA dehydrogenase, C-terminal domain.	Pfam:pfam02771 Acyl-CoA dehydrogenase, N-terminal domain.	0.945
AMM32918.1	AMM33746.1	SA2016_2249	SA2016_3081	Pfam:pfam00441 Acyl-CoA dehydrogenase, C-terminal domain.	Pfam:pfam00441 Acyl-CoA dehydrogenase, C-terminal domain.	0.929

page 1 of 2

Server load: low (22%) [HD]

Permalink

Network

Neighborhood

Databases

Fusion

Experiments

Cooccurrence

Textmining

Coexpression

© STRING Consortium 2025

Credits

Access

Info

About