STRINGSTRING
dnaA dnaA AMM30715.1 AMM30715.1 AMM30748.1 AMM30748.1 AMM30788.1 AMM30788.1 AMM30797.1 AMM30797.1 AMM30996.1 AMM30996.1 AMM31287.1 AMM31287.1 AMM31288.1 AMM31288.1 AMM31403.1 AMM31403.1 AMM31422.1 AMM31422.1 csrA csrA AMM31437.1 AMM31437.1 AMM31465.1 AMM31465.1 AMM31466.1 AMM31466.1 AMM31591.1 AMM31591.1 AMM31592.1 AMM31592.1 AMM31601.1 AMM31601.1 AMM31613.1 AMM31613.1 AMM31688.1 AMM31688.1 AMM32252.1 AMM32252.1 AMM32308.1 AMM32308.1 AMM32444.1 AMM32444.1 AMM32506.1 AMM32506.1 AMM32509.1 AMM32509.1 AMM32530.1 AMM32530.1 AMM32531.1 AMM32531.1 AMM32645.1 AMM32645.1 AMM32655.1 AMM32655.1 AMM32688.1 AMM32688.1 AMM32921.1 AMM32921.1 AMM33067.1 AMM33067.1 AMM33069.1 AMM33069.1 AMM33195.1 AMM33195.1 AMM33263.1 AMM33263.1 AMM33307.1 AMM33307.1 AMM33308.1 AMM33308.1 AMM33328.1 AMM33328.1 AMM33499.1 AMM33499.1 kdpA kdpA kdpB kdpB kdpC kdpC AMM33505.1 AMM33505.1 AMM33507.1 AMM33507.1 AMM33651.1 AMM33651.1 AMM33697.1 AMM33697.1 AMM33703.1 AMM33703.1 AMM33704.1 AMM33704.1 AMM33705.1 AMM33705.1 AMM33706.1 AMM33706.1 AMM33744.1 AMM33744.1 AMM33756.1 AMM33756.1 AMM33764.1 AMM33764.1 AMM33765.1 AMM33765.1 AMM33853.1 AMM33853.1 AMM33926.1 AMM33926.1 AMM33930.1 AMM33930.1 AMM33975.1 AMM33975.1 AMM33995.1 AMM33995.1 AMM34039.1 AMM34039.1 glsA glsA AMM34280.1 AMM34280.1 AMM34335.1 AMM34335.1 AMM34527.1 AMM34527.1 AMM34607.1 AMM34607.1 AMM34613.1 AMM34613.1 AMM34698.1 AMM34698.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
dnaAChromosomal replication initiation protein; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family. (474 aa)
AMM30715.1LuxR family transcriptional regulator; Pfam:pfam00072 Response regulator receiver domain. (297 aa)
AMM30748.1Pfam:pfam02667 Short chain fatty acid transporter. (483 aa)
AMM30788.1Pfam:pfam13350 Tyrosine phosphatase family. (284 aa)
AMM30797.1Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain protein; Pfam:pfam00072 Response regulator receiver domain. (237 aa)
AMM30996.1Phosphate ABC transporter substrate-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family. (371 aa)
AMM31287.1Hypothetical protein; Pfam:pfam01590 GAF domain. (567 aa)
AMM31288.1LuxR family transcriptional regulator; Pfam:pfam00072 Response regulator receiver domain. (225 aa)
AMM31403.1Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. (287 aa)
AMM31422.1Flagellar motor protein MotA; Pfam:pfam01618 MotA/TolQ/ExbB proton channel family. (266 aa)
csrAHypothetical protein; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW. (81 aa)
AMM31437.1FliA/WhiG subfamily RNA polymerase sigma-28 subunit; Pfam:pfam04542 Sigma-70 region 2; Belongs to the sigma-70 factor family. (316 aa)
AMM31465.1Pfam:pfam02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. (393 aa)
AMM31466.1Pfam:pfam00486 Transcriptional regulatory protein, C terminal. (222 aa)
AMM31591.1Pfam:pfam02702 Osmosensitive K+ channel His kinase sensor domain. (839 aa)
AMM31592.1Two component transcriptional regulator, winged helix family; Pfam:pfam00072 Response regulator receiver domain. (248 aa)
AMM31601.1Pfam:pfam02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. (578 aa)
AMM31613.1LuxR family transcriptional regulator; Pfam:pfam00072 Response regulator receiver domain. (220 aa)
AMM31688.1Pfam:pfam02350 UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. (396 aa)
AMM32252.1Putative transcriptional regulator; Pfam:pfam00072 Response regulator receiver domain. (225 aa)
AMM32308.1Pfam:pfam03328 HpcH/HpaI aldolase/citrate lyase family; Belongs to the HpcH/HpaI aldolase family. (279 aa)
AMM32444.1C4-dicarboxylate transporter; Pfam:pfam00375 Sodium:dicarboxylate symporter family; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. (462 aa)
AMM32506.1Pfam:pfam00120 Glutamine synthetase, catalytic domain. (376 aa)
AMM32509.1Pfam:pfam00120 Glutamine synthetase, catalytic domain. (474 aa)
AMM32530.1Pfam:pfam01654 Bacterial Cytochrome Ubiquinol Oxidase. (543 aa)
AMM32531.1Pfam:pfam02322 Cytochrome oxidase subunit II. (350 aa)
AMM32645.1Pfam:pfam02628 Cytochrome oxidase assembly protein. (309 aa)
AMM32655.13-ketoacyl-CoA thiolase Acetyl-CoA acetyltransferase; Pfam:pfam00108 Thiolase, N-terminal domain; Belongs to the thiolase-like superfamily. Thiolase family. (404 aa)
AMM32688.1Acetyl-CoA acyltransferase; Pfam:pfam00108 Thiolase, N-terminal domain; Belongs to the thiolase-like superfamily. Thiolase family. (440 aa)
AMM32921.1Acetyl-CoA acetyltransferase; Pfam:pfam00108 Thiolase, N-terminal domain; Belongs to the thiolase-like superfamily. Thiolase family. (404 aa)
AMM33067.1Pfam:pfam00543 Nitrogen regulatory protein P-II; Belongs to the P(II) protein family. (112 aa)
AMM33069.1Pfam:pfam00543 Nitrogen regulatory protein P-II. (112 aa)
AMM33195.1Hypothetical protein; Pfam:pfam09924 Uncharacterized conserved protein (DUF2156). (835 aa)
AMM33263.1Pfam:pfam02557 D-alanyl-D-alanine carboxypeptidase. (431 aa)
AMM33307.1Pfam:pfam02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. (673 aa)
AMM33308.1Pfam:pfam00072 Response regulator receiver domain. (224 aa)
AMM33328.1Signal protein PDZ; Pfam:pfam13365 Trypsin-like peptidase domain. (559 aa)
AMM33499.1Pfam:pfam02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. (548 aa)
kdpAPotassium-transporting ATPase A chain; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane. (546 aa)
kdpBPotassium-transporting ATPase B chain; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system. Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IA subfamily. (707 aa)
kdpCPotassium-transporting ATPase C chain; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP-binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB/KdpC/ATP ternary complex. (193 aa)
AMM33505.1Pfam:pfam02702 Osmosensitive K+ channel His kinase sensor domain. (843 aa)
AMM33507.1Two component transcriptional regulator, winged helix family; Pfam:pfam00486 Transcriptional regulatory protein, C terminal. (109 aa)
AMM33651.1Diguanylate cyclase; Pfam:pfam02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. (552 aa)
AMM33697.1acetyl-CoA acetyltransferase; Pfam:pfam00108 Thiolase, N-terminal domain; Belongs to the thiolase-like superfamily. Thiolase family. (395 aa)
AMM33703.1Pfam:pfam02665 Nitrate reductase gamma subunit. (249 aa)
AMM33704.1Pfam:pfam02613 Nitrate reductase delta subunit. (222 aa)
AMM33705.1Nitrate reductase Z subunit beta; Pfam:pfam13247 4Fe-4S dicluster domain. (557 aa)
AMM33706.1Nitrate reductase Z subunit alpha; Pfam:pfam00384 Molybdopterin oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (1226 aa)
AMM33744.1acetyl-CoA acetyltransferase; Pfam:pfam00108 Thiolase, N-terminal domain; Belongs to the thiolase-like superfamily. Thiolase family. (403 aa)
AMM33756.1Putative citrate lyase beta subunit; Pfam:pfam03328 HpcH/HpaI aldolase/citrate lyase family; Belongs to the HpcH/HpaI aldolase family. (296 aa)
AMM33764.1Two component transcriptional regulator, winged helix family; Pfam:pfam00072 Response regulator receiver domain. (233 aa)
AMM33765.1Pfam:pfam02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. (511 aa)
AMM33853.1Pfam:pfam01451 Low molecular weight phosphotyrosine protein phosphatase. (202 aa)
AMM33926.1LuxR family transcriptional regulator; Pfam:pfam00072 Response regulator receiver domain. (245 aa)
AMM33930.1acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (396 aa)
AMM33975.1Transcriptional regulator, Crp/Fnr family; Pfam:pfam00027 Cyclic nucleotide-binding domain. (225 aa)
AMM33995.1Malate dehydrogenase; Pfam:pfam03949 Malic enzyme, NAD binding domain. (460 aa)
AMM34039.1Protein tyrosine phosphatase; Pfam:pfam01451 Low molecular weight phosphotyrosine protein phosphatase. (189 aa)
glsAGlutaminase; Pfam:pfam04960 Glutaminase; Belongs to the glutaminase family. (318 aa)
AMM34280.1Malate dehydrogenase (Oxaloacetate decarboxylating); Pfam:pfam03949 Malic enzyme, NAD binding domain. (398 aa)
AMM34335.1Pfam:pfam00375 Sodium:dicarboxylate symporter family; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. (436 aa)
AMM34527.1Pfam:pfam13631 Cytochrome b(N-terminal)/b6/petB. (246 aa)
AMM34607.1Vancomycin resistance protein; Pfam:pfam04294 VanW like protein. (285 aa)
AMM34613.1Pfam:pfam00196 Bacterial regulatory proteins, luxR family. (220 aa)
AMM34698.1Hypothetical protein. (476 aa)
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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