STRINGSTRING
AMM31555.1 AMM31555.1 AMM31556.1 AMM31556.1 AMM31558.1 AMM31558.1 AMM31592.1 AMM31592.1 AMM31704.1 AMM31704.1 AMM31706.1 AMM31706.1 AMM31707.1 AMM31707.1 AMM31721.1 AMM31721.1 AMM31782.1 AMM31782.1 AMM31983.1 AMM31983.1 AMM31989.1 AMM31989.1 AMM31990.1 AMM31990.1 AMM31991.1 AMM31991.1 AMM31992.1 AMM31992.1 AMM31993.1 AMM31993.1 AMM32004.1 AMM32004.1 AMM32081.1 AMM32081.1 AMM32082.1 AMM32082.1 AMM32085.1 AMM32085.1 AMM32131.1 AMM32131.1 AMM32252.1 AMM32252.1 AMM32268.1 AMM32268.1 AMM32464.1 AMM32464.1 AMM32469.1 AMM32469.1 AMM32584.1 AMM32584.1 ribA ribA trpE trpE AMM32637.1 AMM32637.1 AMM32654.1 AMM32654.1 AMM32841.1 AMM32841.1 AMM32901.1 AMM32901.1 ffh ffh ftsY ftsY AMM33120.1 AMM33120.1 AMM33257.1 AMM33257.1 AMM33258.1 AMM33258.1 AMM33259.1 AMM33259.1 AMM33260.1 AMM33260.1 AMM33261.1 AMM33261.1 secA secA AMM33312.1 AMM33312.1 AMM33313.1 AMM33313.1 AMM33314.1 AMM33314.1 AMM33315.1 AMM33315.1 AMM33411.1 AMM33411.1 AMM33413.1 AMM33413.1 AMM33414.1 AMM33414.1 AMM33415.1 AMM33415.1 AMM33507.1 AMM33507.1 secY secY secE secE AMM33764.1 AMM33764.1 AMM33844.1 AMM33844.1 AMM33862.1 AMM33862.1 AMM33922.1 AMM33922.1 AMM33975.1 AMM33975.1 AMM34241.1 AMM34241.1 ribA-2 ribA-2 AMM34471.1 AMM34471.1 AMM34477.1 AMM34477.1 AMM34737.1 AMM34737.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AMM31555.1Pfam:pfam00005 ABC transporter; Belongs to the ABC transporter superfamily. (360 aa)
AMM31556.1ABC-type transporter, integral membrane subunit; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component. (291 aa)
AMM31558.1Polyamine ABC transporter substrate-binding protein; Pfam:pfam13416 Bacterial extracellular solute-binding protein. (384 aa)
AMM31592.1Two component transcriptional regulator, winged helix family; Pfam:pfam00072 Response regulator receiver domain. (248 aa)
AMM31704.1Polyamine ABC transporter substrate-binding protein; Pfam:pfam13416 Bacterial extracellular solute-binding protein. (386 aa)
AMM31706.1ABC-type transporter, integral membrane subunit; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component. (274 aa)
AMM31707.1Pfam:pfam00005 ABC transporter; Belongs to the ABC transporter superfamily. (366 aa)
AMM31721.1Phospholipase C; Pfam:pfam04185 Phosphoesterase family. (698 aa)
AMM31782.1Phospholipase; Pfam:pfam04185 Phosphoesterase family. (444 aa)
AMM31983.1Long-chain-fatty-acid-CoA ligase; Pfam:pfam00501 AMP-binding enzyme. (497 aa)
AMM31989.1Amino acid-binding protein; Pfam:pfam13458 Periplasmic binding protein. (418 aa)
AMM31990.1Pfam:pfam02653 Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family. (371 aa)
AMM31991.1ABC transporter permease; Pfam:pfam02653 Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family. (293 aa)
AMM31992.1Pfam:pfam00005 ABC transporter. (236 aa)
AMM31993.1Leucine/isoleucine/valine transporter ATP-binding subunit; Pfam:pfam00005 ABC transporter. (260 aa)
AMM32004.1Regulatory protein; Pfam:pfam03551 Transcriptional regulator PadR-like family. (206 aa)
AMM32081.1Amino acid ABC transporter substrate-binding protein; Pfam:pfam13458 Periplasmic binding protein. (458 aa)
AMM32082.1Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family; Pfam:pfam00005 ABC transporter. (265 aa)
AMM32085.1Pfam:pfam02653 Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family. (444 aa)
AMM32131.1Long-chain fatty acid--CoA ligase; Pfam:pfam00501 AMP-binding enzyme. (628 aa)
AMM32252.1Putative transcriptional regulator; Pfam:pfam00072 Response regulator receiver domain. (225 aa)
AMM32268.1Pfam:pfam04657 Protein of unknown function, DUF606. (314 aa)
AMM32464.1Long-chain fatty acid--CoA ligase; Pfam:pfam00501 AMP-binding enzyme. (606 aa)
AMM32469.13-deoxy-D-arabino-heptulosonate 7-phosphate synthase; Pfam:pfam01474 Class-II DAHP synthetase family; Belongs to the class-II DAHP synthase family. (464 aa)
AMM32584.1Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. (362 aa)
ribAGTP cyclohydrolase; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate; Belongs to the GTP cyclohydrolase II family. (228 aa)
trpEAnthranilate synthase subunit I; Part of a heterotetrameric complex that catalyzes the two- step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine-binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrat [...] (532 aa)
AMM32637.1Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. (85 aa)
AMM32654.1AMP-dependent synthetase and ligase; Pfam:pfam00501 AMP-binding enzyme. (469 aa)
AMM32841.1Pfam:pfam02699 Preprotein translocase subunit. (149 aa)
AMM32901.1Hypothetical protein; Pfam:pfam01614 Bacterial transcriptional regulator. (241 aa)
ffhSignal recognition particle; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily. (528 aa)
ftsYCell division protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). (406 aa)
AMM33120.1ABC transporter substrate-binding protein; Pfam:pfam00496 Bacterial extracellular solute-binding proteins, family 5 Middle. (559 aa)
AMM33257.1Inner-membrane translocator; Pfam:pfam02653 Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family. (348 aa)
AMM33258.1Inner-membrane translocator; Pfam:pfam02653 Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family. (290 aa)
AMM33259.1Pfam:pfam00005 ABC transporter. (241 aa)
AMM33260.1Pfam:pfam00005 ABC transporter. (255 aa)
AMM33261.1ABC branched-chain amino acid transporter substrate-binding protein; Pfam:pfam13458 Periplasmic binding protein. (402 aa)
secAProtein translocase subunit SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. (900 aa)
AMM33312.1Putative peptide ABC transporter ATP-binding protein; Pfam:pfam00005 ABC transporter; Belongs to the ABC transporter superfamily. (568 aa)
AMM33313.1Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component. (244 aa)
AMM33314.1Dipeptide/oligopeptide/nickel ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component. (362 aa)
AMM33315.1Peptide ABC transporter substrate-binding protein; Pfam:pfam00496 Bacterial extracellular solute-binding proteins, family 5 Middle. (543 aa)
AMM33411.1Putative peptide ABC transporter ATP-binding protein; Pfam:pfam00005 ABC transporter; Belongs to the ABC transporter superfamily. (621 aa)
AMM33413.1ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component. (402 aa)
AMM33414.1ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component. (509 aa)
AMM33415.1Pfam:pfam00496 Bacterial extracellular solute-binding proteins, family 5 Middle. (590 aa)
AMM33507.1Two component transcriptional regulator, winged helix family; Pfam:pfam00486 Transcriptional regulatory protein, C terminal. (109 aa)
secYPreprotein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. (438 aa)
secEPreprotein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation. (86 aa)
AMM33764.1Two component transcriptional regulator, winged helix family; Pfam:pfam00072 Response regulator receiver domain. (233 aa)
AMM33844.1Glutamate decarboxylase; Pfam:pfam00282 Pyridoxal-dependent decarboxylase conserved domain; Belongs to the group II decarboxylase family. (477 aa)
AMM33862.1Phospholipase C; Pfam:pfam04185 Phosphoesterase family. (567 aa)
AMM33922.1Phospho-2-dehydro-3-deoxyheptonate aldolase; Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D-arabino- heptulosonate-7-phosphate (DAHP). (381 aa)
AMM33975.1Transcriptional regulator, Crp/Fnr family; Pfam:pfam00027 Cyclic nucleotide-binding domain. (225 aa)
AMM34241.1Pfam:pfam04185 Phosphoesterase family. (443 aa)
ribA-2GTP cyclohydrolase; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate; Belongs to the GTP cyclohydrolase II family. (221 aa)
AMM34471.1Hypothetical protein; Pfam:pfam00496 Bacterial extracellular solute-binding proteins, family 5 Middle. (529 aa)
AMM34477.1Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component. (295 aa)
AMM34737.1Preprotein translocase subunit YidC; Pfam:pfam02096 60Kd inner membrane protein. (321 aa)
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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