(5 nodes) Mixed, incl. Ribosomal protein S14p/S29e, and Ribosomal protein S9 network (Propithecus coquereli)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	MRPS35	Uncharacterized protein. (192 aa)
	MRPS9	Mitochondrial ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. (367 aa)
	MRPS14	Mitochondrial ribosomal protein S14. (128 aa)
	MRPS10	Mitochondrial ribosomal protein S10. (210 aa)
	MRPS5	Mitochondrial ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family. (403 aa)

Your Current Organism:

Propithecus coquereli

NCBI taxonomy Id: 379532
Other names: P. coquereli, Propithecus verreauxi coquereli

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
MRPS10	MRPS14	ENSPCOP00000023091	ENSPCOP00000016875	Mitochondrial ribosomal protein S10.	Mitochondrial ribosomal protein S14.	0.999
MRPS10	MRPS35	ENSPCOP00000023091	ENSPCOP00000008725	Mitochondrial ribosomal protein S10.	Uncharacterized protein.	0.999
MRPS10	MRPS5	ENSPCOP00000023091	ENSPCOP00000027780	Mitochondrial ribosomal protein S10.	Mitochondrial ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.	0.999
MRPS10	MRPS9	ENSPCOP00000023091	ENSPCOP00000014141	Mitochondrial ribosomal protein S10.	Mitochondrial ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.999
MRPS14	MRPS10	ENSPCOP00000016875	ENSPCOP00000023091	Mitochondrial ribosomal protein S14.	Mitochondrial ribosomal protein S10.	0.999
MRPS14	MRPS35	ENSPCOP00000016875	ENSPCOP00000008725	Mitochondrial ribosomal protein S14.	Uncharacterized protein.	0.999
MRPS14	MRPS5	ENSPCOP00000016875	ENSPCOP00000027780	Mitochondrial ribosomal protein S14.	Mitochondrial ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.	0.999
MRPS14	MRPS9	ENSPCOP00000016875	ENSPCOP00000014141	Mitochondrial ribosomal protein S14.	Mitochondrial ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.999
MRPS35	MRPS10	ENSPCOP00000008725	ENSPCOP00000023091	Uncharacterized protein.	Mitochondrial ribosomal protein S10.	0.999
MRPS35	MRPS14	ENSPCOP00000008725	ENSPCOP00000016875	Uncharacterized protein.	Mitochondrial ribosomal protein S14.	0.999
MRPS35	MRPS5	ENSPCOP00000008725	ENSPCOP00000027780	Uncharacterized protein.	Mitochondrial ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.	0.999
MRPS35	MRPS9	ENSPCOP00000008725	ENSPCOP00000014141	Uncharacterized protein.	Mitochondrial ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.999
MRPS5	MRPS10	ENSPCOP00000027780	ENSPCOP00000023091	Mitochondrial ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.	Mitochondrial ribosomal protein S10.	0.999
MRPS5	MRPS14	ENSPCOP00000027780	ENSPCOP00000016875	Mitochondrial ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.	Mitochondrial ribosomal protein S14.	0.999
MRPS5	MRPS35	ENSPCOP00000027780	ENSPCOP00000008725	Mitochondrial ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.	Uncharacterized protein.	0.999
MRPS5	MRPS9	ENSPCOP00000027780	ENSPCOP00000014141	Mitochondrial ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.	Mitochondrial ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.999
MRPS9	MRPS10	ENSPCOP00000014141	ENSPCOP00000023091	Mitochondrial ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	Mitochondrial ribosomal protein S10.	0.999
MRPS9	MRPS14	ENSPCOP00000014141	ENSPCOP00000016875	Mitochondrial ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	Mitochondrial ribosomal protein S14.	0.999
MRPS9	MRPS35	ENSPCOP00000014141	ENSPCOP00000008725	Mitochondrial ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	Uncharacterized protein.	0.999
MRPS9	MRPS5	ENSPCOP00000014141	ENSPCOP00000027780	Mitochondrial ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	Mitochondrial ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.	0.999