STRINGSTRING
NOP2 NOP2 NIP7 NIP7 DDX55 DDX55 RPF2 RPF2 MRTO4 MRTO4 LOC105805830 LOC105805830 DDX18 DDX18 PES1 PES1 ENSPCOP00000010560 ENSPCOP00000010560 ENSPCOP00000012921 ENSPCOP00000012921 NOC3L NOC3L WDR12 WDR12 ENSPCOP00000018567 ENSPCOP00000018567 RSL1D1 RSL1D1 EBNA1BP2 EBNA1BP2 BOP1 BOP1 NIFK NIFK FTSJ3 FTSJ3 WDR74 WDR74 GNL3 GNL3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
NOP2NOP2 nucleolar protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (847 aa)
NIP760S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 34S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (180 aa)
DDX55RNA helicase. (600 aa)
RPF2Ribosome production factor 2 homolog. (283 aa)
MRTO4Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (239 aa)
LOC105805830Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. (612 aa)
DDX18RNA helicase. (671 aa)
PES1Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome; Belongs to the pescadillo family. (588 aa)
ENSPCOP00000010560Brix domain-containing protein. (297 aa)
ENSPCOP00000012921Ribosomal_L28e domain-containing protein. (150 aa)
NOC3LNucleolar complex protein 3 homolog. (715 aa)
WDR12Ribosome biogenesis protein WDR12; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (398 aa)
ENSPCOP00000018567TRASH domain-containing protein. (165 aa)
RSL1D1Ribosomal L1 domain containing 1. (357 aa)
EBNA1BP2EBNA1 binding protein 2. (334 aa)
BOP1Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (737 aa)
NIFKNucleolar protein interacting with the FHA domain of MKI67. (185 aa)
FTSJ3pre-rRNA processing protein FTSJ3; Probable methyltransferase involved in the processing of the 34S pre-rRNA to 18S rRNA and in 40S ribosomal subunit formation. Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. (838 aa)
WDR74WD repeat domain 74. (384 aa)
GNL3G protein nucleolar 3. (549 aa)
Your Current Organism:
Propithecus coquereli
NCBI taxonomy Id: 379532
Other names: P. coquereli, Propithecus verreauxi coquereli
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