STRINGSTRING
RECQL4 RECQL4 ENSPCOP00000005384 ENSPCOP00000005384 NABP1 NABP1 MACROH2A1 MACROH2A1 ENSPCOP00000005162 ENSPCOP00000005162 XRCC4 XRCC4 ENSPCOP00000005069 ENSPCOP00000005069 ERCC4 ERCC4 XRCC3 XRCC3 FEN1 FEN1 POT1 POT1 TERB1 TERB1 ENSPCOP00000004135 ENSPCOP00000004135 DHX36 DHX36 NSMCE4A NSMCE4A ENSPCOP00000003703 ENSPCOP00000003703 CBX1 CBX1 NAT10 NAT10 ENSPCOP00000002972 ENSPCOP00000002972 ENSPCOP00000002858 ENSPCOP00000002858 ENSPCOP00000002776 ENSPCOP00000002776 LOC105805699 LOC105805699 MAJIN MAJIN ZSCAN4 ZSCAN4 ORC4 ORC4 NBN NBN RPA1 RPA1 TINF2 TINF2 SETX SETX KDM1A KDM1A MTA2 MTA2 SPO11 SPO11 PML PML TERF2 TERF2 EZH2 EZH2 ORC2 ORC2 MEN1 MEN1 ZBTB10 ZBTB10 SMG6 SMG6 HAT1 HAT1 RNF8 RNF8 ATRX ATRX MCM6 MCM6 SLF1 SLF1 CHD4 CHD4 PIF1 PIF1 ENSPCOP00000013418 ENSPCOP00000013418 ENSPCOP00000013227 ENSPCOP00000013227 TERF1 TERF1 LOC105827239 LOC105827239 STN1 STN1 MCM2 MCM2 RAD51AP1 RAD51AP1 SLX4 SLX4 PARP1 PARP1 DCLRE1B DCLRE1B ENSPCOP00000021297 ENSPCOP00000021297 TELO2 TELO2 CDC73 CDC73 SSB SSB ENSPCOP00000022360 ENSPCOP00000022360 ORC3 ORC3 CBX5 CBX5 RBBP7 RBBP7 UPF1 UPF1 ENSPCOP00000023982 ENSPCOP00000023982 TNKS2 TNKS2 ORC1 ORC1 ZNF827 ZNF827 ENSPCOP00000024841 ENSPCOP00000024841 SMC5 SMC5 MACROH2A2 MACROH2A2 RBBP4 RBBP4 ENSPCOP00000025432 ENSPCOP00000025432 DMC1 DMC1 TEN1 TEN1 TEP1 TEP1 ATF7 ATF7 LOC105816693 LOC105816693 TERF2IP TERF2IP NSMCE2 NSMCE2 H3-4 H3-4 CTC1 CTC1 H2AC1 H2AC1 ENSPCOP00000028220 ENSPCOP00000028220 ENSPCOP00000028227 ENSPCOP00000028227 ENSPCOP00000028231 ENSPCOP00000028231 LOC105805698 LOC105805698 GAR1 GAR1 DNA2 DNA2 WRAP53 WRAP53 XRCC6 XRCC6 ACD ACD RIF1 RIF1 TFIP11 TFIP11 TERB2 TERB2 ENSPCOP00000030829 ENSPCOP00000030829 CDK2 CDK2 NSMCE1 NSMCE1 LOC105815151 LOC105815151 ORC5 ORC5 SMC6 SMC6 SIRT6 SIRT6 ERCC1 ERCC1 SUN2 SUN2 LRWD1 LRWD1 LOC105817821 LOC105817821 CCDC155 CCDC155 GATAD2B GATAD2B LOC105819903 LOC105819903 MRE11 MRE11 ZBTB48 ZBTB48 BRCA2 BRCA2 RAD51 RAD51 TP53BP1 TP53BP1 NABP2 NABP2 MCM4 MCM4 MCM5 MCM5 MCM7 MCM7 PRKDC PRKDC LOC105805697 LOC105805697 MSH2 MSH2 XRCC5 XRCC5
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RECQL4RecQ like helicase 4. (842 aa)
ENSPCOP00000005384annotation not available (103 aa)
NABP1Nucleic acid binding protein 1. (126 aa)
MACROH2A1Core histone macro-H2A; Variant histone H2A which replaces conventional H2A in a subset of nucleosomes. (372 aa)
ENSPCOP00000005162WD_REPEATS_REGION domain-containing protein. (355 aa)
XRCC4X-ray repair cross complementing 4. (297 aa)
ENSPCOP00000005069annotation not available (103 aa)
ERCC4ERCC excision repair 4, endonuclease catalytic subunit. (879 aa)
XRCC3DNA repair protein; Involved in the homologous recombination repair (HRR) pathway of double-stranded DNA, thought to repair chromosomal fragmentation, translocations and deletions; Belongs to the RecA family. RAD51 subfamily. (346 aa)
FEN1Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] (380 aa)
POT1Protection of telomeres 1. (600 aa)
TERB1Telomere repeat binding bouquet formation protein 1. (592 aa)
ENSPCOP00000004135Uncharacterized protein. (520 aa)
DHX36HA2 domain-containing protein. (718 aa)
NSMCE4ANon-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids. (281 aa)
ENSPCOP00000003703annotation not available (103 aa)
CBX1Uncharacterized protein. (185 aa)
NAT10RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein THUMPD1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. (1026 aa)
ENSPCOP00000002972annotation not available (103 aa)
ENSPCOP00000002858annotation not available (103 aa)
ENSPCOP00000002776Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. Active in progenitor and cancer cells. Inactive, or very low activity, in normal somatic cells. Catalytic component of the teleromerase holoenzyme complex whose main activity is the elongation of telomeres by acting as a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme. Catalyzes the RNA-dependent extension of 3'-chromosomal termini with the 6-nuc [...] (330 aa)
LOC105805699Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
MAJINMembrane anchored junction protein. (169 aa)
ZSCAN4Uncharacterized protein. (433 aa)
ORC4Origin recognition complex subunit 4; Component of the origin recognition complex (ORC) that binds origins of replication; Belongs to the ORC4 family. (436 aa)
NBNNbs1_C domain-containing protein. (429 aa)
RPA1Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (616 aa)
TINF2TERF1 interacting nuclear factor 2. (451 aa)
SETXSenataxin. (2676 aa)
KDM1ALysine-specific histone demethylase; Histone demethylase that demethylates both 'Lys-4' (H3K4me) and 'Lys-9' (H3K9me) of histone H3, thereby acting as a coactivator or a corepressor, depending on the context. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Acts as a corepressor by mediating demethylation of H3K4me, a specific tag for epigenetic transcriptional activation. Demethylates both mono- (H3K4me1) and di-methylated (H3K4me2) H3K4me; Belongs to the flavin monoamine oxidase family. (875 aa)
MTA2Metastasis associated 1 family member 2. (668 aa)
SPO11SPO11 initiator of meiotic double stranded breaks. (285 aa)
PMLPromyelocytic leukemia. (887 aa)
TERF2Telomeric repeat binding factor 2. (542 aa)
EZH2Enhancer of zeste 2 polycomb repressive complex 2 subunit. (751 aa)
ORC2Origin recognition complex subunit 2. (546 aa)
MEN1Menin 1. (616 aa)
ZBTB10Zinc finger and BTB domain containing 10. (870 aa)
SMG6SMG6 nonsense mediated mRNA decay factor. (1419 aa)
HAT1Histone acetyltransferase 1. (394 aa)
RNF8Ring finger protein 8. (488 aa)
ATRXATRX chromatin remodeler. (2447 aa)
MCM6DNA helicase; Belongs to the MCM family. (821 aa)
SLF1SMC5-SMC6 complex localization factor 1. (1059 aa)
CHD4Uncharacterized protein. (1899 aa)
PIF1ATP-dependent DNA helicase PIF1; DNA-dependent ATPase and 5'-3' DNA helicase required for the maintenance of both mitochondrial and nuclear genome stability. Efficiently unwinds G-quadruplex (G4) DNA structures and forked RNA-DNA hybrids. Resolves G4 structures, preventing replication pausing and double-strand breaks (DSBs) at G4 motifs. Involved in the maintenance of telomeric DNA. Inhibits telomere elongation, de novo telomere formation and telomere addition to DSBs via catalytic inhibition of telomerase. Reduces the processivity of telomerase by displacing active telomerase from DNA [...] (643 aa)
ENSPCOP00000013418Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (88 aa)
ENSPCOP00000013227Uncharacterized protein. (169 aa)
TERF1Telomeric repeat-binding factor; Binds the telomeric double-stranded 5'-TTAGGG-3' repeat. (435 aa)
LOC105827239Uncharacterized protein. (181 aa)
STN1CST complex subunit STN1; Component of the CST complex proposed to act as a specialized replication factor promoting DNA replication under conditions of replication stress or natural replication barriers such as the telomere duplex. The CST complex binds single-stranded DNA with high affinity in a sequence-independent manner, while isolated subunits bind DNA with low affinity by themselves. Initially the CST complex has been proposed to protect telomeres from DNA degradation. However, the CST complex has been shown to be involved in several aspects of telomere replication. (369 aa)
MCM2DNA helicase; Belongs to the MCM family. (738 aa)
RAD51AP1RAD51 associated protein 1. (231 aa)
SLX4SLX4 structure-specific endonuclease subunit. (1806 aa)
PARP1Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair. (1014 aa)
DCLRE1BDNA cross-link repair 1B. (529 aa)
ENSPCOP00000021297Uncharacterized protein; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (76 aa)
TELO2Telomere maintenance 2. (836 aa)
CDC73Cell division cycle 73. (429 aa)
SSBSmall RNA binding exonuclease protection factor La. (367 aa)
ENSPCOP00000022360FHA domain-containing protein. (60 aa)
ORC3Origin recognition complex subunit 3. (712 aa)
CBX5Chromobox 5. (191 aa)
RBBP7RB binding protein 7, chromatin remodeling factor. (469 aa)
UPF1UPF1 RNA helicase and ATPase. (1129 aa)
ENSPCOP00000023982Chromo domain-containing protein. (156 aa)
TNKS2Poly [ADP-ribose] polymerase. (1018 aa)
ORC1Origin recognition complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication. (867 aa)
ZNF827Zinc finger protein 827. (1082 aa)
ENSPCOP00000024841Uncharacterized protein. (84 aa)
SMC5SMC_N domain-containing protein. (1102 aa)
MACROH2A2Core histone macro-H2A; Variant histone H2A which replaces conventional H2A in a subset of nucleosomes. (372 aa)
RBBP4RB binding protein 4, chromatin remodeling factor. (425 aa)
ENSPCOP00000025432Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. Active in progenitor and cancer cells. Inactive, or very low activity, in normal somatic cells. Catalytic component of the teleromerase holoenzyme complex whose main activity is the elongation of telomeres by acting as a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme. Catalyzes the RNA-dependent extension of 3'-chromosomal termini with the 6-nuc [...] (747 aa)
DMC1Meiotic recombination protein; May participate in meiotic recombination, specifically in homologous strand assimilation, which is required for the resolution of meiotic double-strand breaks; Belongs to the RecA family. DMC1 subfamily. (325 aa)
TEN1Uncharacterized protein. (137 aa)
TEP1Telomerase associated protein 1. (2562 aa)
ATF7Cyclic AMP-dependent transcription factor ATF-7; Plays important functions in early cell signaling. Binds the cAMP response element (CRE) (consensus: 5'-GTGACGT[AG][AG]-3'), a sequence present in many viral and cellular promoters. (483 aa)
LOC105816693Histone H4. (103 aa)
TERF2IPTERF2 interacting protein. (393 aa)
NSMCE2NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase. (247 aa)
H3-4Histone H3; Belongs to the histone H3 family. (136 aa)
CTC1CST telomere replication complex component 1. (1221 aa)
H2AC1Histone H2A; Belongs to the histone H2A family. (131 aa)
ENSPCOP00000028220annotation not available (103 aa)
ENSPCOP00000028227annotation not available (103 aa)
ENSPCOP00000028231Uncharacterized protein. (264 aa)
LOC105805698Histone H4. (103 aa)
GAR1H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (196 aa)
DNA2Uncharacterized protein. (833 aa)
WRAP53WD repeat containing antisense to TP53. (540 aa)
XRCC6X-ray repair cross complementing 6. (496 aa)
ACDACD shelterin complex subunit and telomerase recruitment factor. (513 aa)
RIF1Replication timing regulatory factor 1. (2476 aa)
TFIP11Tuftelin-interacting protein 11; Involved in pre-mRNA splicing, specifically in spliceosome disassembly during late-stage splicing events. Intron turnover seems to proceed through reactions in two lariat-intron associated complexes termed Intron Large (IL) and Intron Small (IS). In cooperation with DHX15 seems to mediate the transition of the U2, U5 and U6 snRNP- containing IL complex to the snRNP-free IS complex leading to efficient debranching and turnover of excised introns. May play a role in the differentiation of ameloblasts and odontoblasts or in the forming of the enamel extrac [...] (837 aa)
TERB2Telomere repeat binding bouquet formation protein 2. (123 aa)
ENSPCOP00000030829G-patch domain-containing protein. (169 aa)
CDK2Cyclin dependent kinase 2; Belongs to the protein kinase superfamily. (346 aa)
NSMCE1NSE1 homolog, SMC5-SMC6 complex component. (267 aa)
LOC105815151Uncharacterized protein. (913 aa)
ORC5Origin recognition complex subunit 5. (435 aa)
SMC6Structural maintenance of chromosomes 6. (933 aa)
SIRT6Sirtuin 6. (305 aa)
ERCC1ERCC excision repair 1, endonuclease non-catalytic subunit. (298 aa)
SUN2Sad1 and UNC84 domain containing 2. (734 aa)
LRWD1Leucine rich repeats and WD repeat domain containing 1. (646 aa)
LOC105817821X-ray repair cross-complementing protein 5; Single-stranded DNA-dependent ATP-dependent helicase. Belongs to the ku80 family. (689 aa)
CCDC155Coiled-coil domain containing 155. (567 aa)
GATAD2BGATA zinc finger domain containing 2B. (481 aa)
LOC105819903Uncharacterized protein. (400 aa)
MRE11Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. (709 aa)
ZBTB48Zinc finger and BTB domain containing 48. (688 aa)
BRCA2BRCA2 DNA repair associated. (3419 aa)
RAD51RAD51 recombinase; Belongs to the RecA family. (340 aa)
TP53BP1Tumor protein p53 binding protein 1. (1974 aa)
NABP2Nucleic acid binding protein 2. (211 aa)
MCM4DNA helicase; Belongs to the MCM family. (863 aa)
MCM5DNA helicase; Belongs to the MCM family. (734 aa)
MCM7DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...] (719 aa)
PRKDCProtein kinase, DNA-activated, catalytic subunit; Belongs to the PI3/PI4-kinase family. (4130 aa)
LOC105805697Histone H4. (103 aa)
MSH2DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (868 aa)
XRCC5X-ray repair cross-complementing protein 5; Single-stranded DNA-dependent ATP-dependent helicase. Belongs to the ku80 family. (677 aa)
Your Current Organism:
Propithecus coquereli
NCBI taxonomy Id: 379532
Other names: P. coquereli, Propithecus verreauxi coquereli
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