29 items (Propithecus coquereli) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC105805698	Histone H4. (103 aa)
	ASF1B	Anti-silencing function 1B histone chaperone. (202 aa)
	LOC105805699	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
	ENSPCOP00000002858	annotation not available (103 aa)
	ENSPCOP00000002972	annotation not available (103 aa)
	ENSPCOP00000003703	annotation not available (103 aa)
	UBN2	Ubinuclein 2. (736 aa)
	ENSPCOP00000005069	annotation not available (103 aa)
	ENSPCOP00000005384	annotation not available (103 aa)
	LOC105805697	Histone H4. (103 aa)
	IPO4	Importin 4. (1080 aa)
	OIP5	Opa interacting protein 5. (188 aa)
	ITGB3BP	Centromere protein R; Transcription coregulator that can have both coactivator and corepressor functions. (177 aa)
	NASP	Nuclear autoantigenic sperm protein. (695 aa)
	HIRA	Protein HIRA; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family. (1017 aa)
	ENSPCOP00000013418	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (88 aa)
	ATRX	ATRX chromatin remodeler. (2447 aa)
	HAT1	Histone acetyltransferase 1. (394 aa)
	UBN1	Ubinuclein 1. (1136 aa)
	ENSPCOP00000021037	Uncharacterized protein. (446 aa)
	ENSPCOP00000021297	Uncharacterized protein; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (76 aa)
	CENPP	Centromere protein P. (288 aa)
	CENPW	Centromere protein W. (88 aa)
	MIS18A	MIS18 kinetochore protein A. (232 aa)
	ASF1A	Anti-silencing function 1A histone chaperone. (204 aa)
	HJURP	Holliday junction recognition protein. (738 aa)
	LOC105816693	Histone H4. (103 aa)
	ENSPCOP00000028220	annotation not available (103 aa)
	ENSPCOP00000028227	annotation not available (103 aa)

Your Current Organism:

Propithecus coquereli

NCBI taxonomy Id: 379532
Other names: P. coquereli, Propithecus verreauxi coquereli

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ASF1A	ASF1B	ENSPCOP00000026344	ENSPCOP00000000409	Anti-silencing function 1A histone chaperone.	Anti-silencing function 1B histone chaperone.	0.763
ASF1A	ATRX	ENSPCOP00000026344	ENSPCOP00000015942	Anti-silencing function 1A histone chaperone.	ATRX chromatin remodeler.	0.540
ASF1A	ENSPCOP00000002858	ENSPCOP00000026344	ENSPCOP00000002858	Anti-silencing function 1A histone chaperone.	annotation not available	0.701
ASF1A	ENSPCOP00000002972	ENSPCOP00000026344	ENSPCOP00000002972	Anti-silencing function 1A histone chaperone.	annotation not available	0.701
ASF1A	ENSPCOP00000003703	ENSPCOP00000026344	ENSPCOP00000003703	Anti-silencing function 1A histone chaperone.	annotation not available	0.701
ASF1A	ENSPCOP00000005069	ENSPCOP00000026344	ENSPCOP00000005069	Anti-silencing function 1A histone chaperone.	annotation not available	0.701
ASF1A	ENSPCOP00000005384	ENSPCOP00000026344	ENSPCOP00000005384	Anti-silencing function 1A histone chaperone.	annotation not available	0.701
ASF1A	ENSPCOP00000013418	ENSPCOP00000026344	ENSPCOP00000013418	Anti-silencing function 1A histone chaperone.	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	0.701
ASF1A	ENSPCOP00000021037	ENSPCOP00000026344	ENSPCOP00000021037	Anti-silencing function 1A histone chaperone.	Uncharacterized protein.	0.790
ASF1A	ENSPCOP00000021297	ENSPCOP00000026344	ENSPCOP00000021297	Anti-silencing function 1A histone chaperone.	Uncharacterized protein; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	0.701
ASF1A	ENSPCOP00000028220	ENSPCOP00000026344	ENSPCOP00000028220	Anti-silencing function 1A histone chaperone.	annotation not available	0.701
ASF1A	ENSPCOP00000028227	ENSPCOP00000026344	ENSPCOP00000028227	Anti-silencing function 1A histone chaperone.	annotation not available	0.701
ASF1A	HAT1	ENSPCOP00000026344	ENSPCOP00000017755	Anti-silencing function 1A histone chaperone.	Histone acetyltransferase 1.	0.946
ASF1A	HIRA	ENSPCOP00000026344	ENSPCOP00000013368	Anti-silencing function 1A histone chaperone.	Protein HIRA; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family.	0.997
ASF1A	IPO4	ENSPCOP00000026344	ENSPCOP00000008095	Anti-silencing function 1A histone chaperone.	Importin 4.	0.930
ASF1A	LOC105805697	ENSPCOP00000026344	ENSPCOP00000005819	Anti-silencing function 1A histone chaperone.	Histone H4.	0.701
ASF1A	LOC105805698	ENSPCOP00000026344	ENSPCOP00000028419	Anti-silencing function 1A histone chaperone.	Histone H4.	0.701
ASF1A	LOC105805699	ENSPCOP00000026344	ENSPCOP00000002692	Anti-silencing function 1A histone chaperone.	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	0.701
ASF1A	LOC105816693	ENSPCOP00000026344	ENSPCOP00000027236	Anti-silencing function 1A histone chaperone.	Histone H4.	0.701
ASF1A	NASP	ENSPCOP00000026344	ENSPCOP00000012050	Anti-silencing function 1A histone chaperone.	Nuclear autoantigenic sperm protein.	0.974