16 items (Propithecus coquereli) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	MAPK1	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (360 aa)
	PTK2	Protein tyrosine kinase 2. (1089 aa)
	THBS1	Thrombospondin 1. (1185 aa)
	ENSPCOP00000021694	Uncharacterized protein. (146 aa)
	CMKLR1	Chemerin chemokine-like receptor 1; Belongs to the G-protein coupled receptor 1 family. (373 aa)
	SLAMF1	Signaling lymphocytic activation molecule family member 1. (368 aa)
	TNFSF18	TNF superfamily member 18. (199 aa)
	MSTN	Myostatin. (376 aa)
	MDK	Midkine. (143 aa)
	MAPK3	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (380 aa)
	CSF1	Colony stimulating factor 1. (438 aa)
	CXCL17	C-X-C motif chemokine ligand 17. (119 aa)
	ENSPCOP00000000279	Uncharacterized protein. (118 aa)
	AKIRIN1	Akirin 1. (193 aa)
	TRPV4	Transient receptor potential cation channel subfamily V member 4; Belongs to the transient receptor (TC 1.A.4) family. (870 aa)
	CSF1R	Colony stimulating factor 1 receptor; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. (964 aa)

Your Current Organism:

Propithecus coquereli

NCBI taxonomy Id: 379532
Other names: P. coquereli, Propithecus verreauxi coquereli

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CSF1	CSF1R	ENSPCOP00000006484	ENSPCOP00000026478	Colony stimulating factor 1.	Colony stimulating factor 1 receptor; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.	0.998
CSF1	ENSPCOP00000021694	ENSPCOP00000006484	ENSPCOP00000021694	Colony stimulating factor 1.	Uncharacterized protein.	0.892
CSF1R	CSF1	ENSPCOP00000026478	ENSPCOP00000006484	Colony stimulating factor 1 receptor; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.	Colony stimulating factor 1.	0.998
CSF1R	ENSPCOP00000021694	ENSPCOP00000026478	ENSPCOP00000021694	Colony stimulating factor 1 receptor; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.	Uncharacterized protein.	0.998
CSF1R	PTK2	ENSPCOP00000026478	ENSPCOP00000025691	Colony stimulating factor 1 receptor; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.	Protein tyrosine kinase 2.	0.542
ENSPCOP00000021694	CSF1	ENSPCOP00000021694	ENSPCOP00000006484	Uncharacterized protein.	Colony stimulating factor 1.	0.892
ENSPCOP00000021694	CSF1R	ENSPCOP00000021694	ENSPCOP00000026478	Uncharacterized protein.	Colony stimulating factor 1 receptor; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.	0.998
MAPK1	MAPK3	ENSPCOP00000029858	ENSPCOP00000008272	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.988
MAPK1	PTK2	ENSPCOP00000029858	ENSPCOP00000025691	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	Protein tyrosine kinase 2.	0.553
MAPK3	MAPK1	ENSPCOP00000008272	ENSPCOP00000029858	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.988
MAPK3	PTK2	ENSPCOP00000008272	ENSPCOP00000025691	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	Protein tyrosine kinase 2.	0.506
PTK2	CSF1R	ENSPCOP00000025691	ENSPCOP00000026478	Protein tyrosine kinase 2.	Colony stimulating factor 1 receptor; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.	0.542
PTK2	MAPK1	ENSPCOP00000025691	ENSPCOP00000029858	Protein tyrosine kinase 2.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.553
PTK2	MAPK3	ENSPCOP00000025691	ENSPCOP00000008272	Protein tyrosine kinase 2.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.506
PTK2	THBS1	ENSPCOP00000025691	ENSPCOP00000024785	Protein tyrosine kinase 2.	Thrombospondin 1.	0.851
THBS1	PTK2	ENSPCOP00000024785	ENSPCOP00000025691	Thrombospondin 1.	Protein tyrosine kinase 2.	0.851