6 items (Propithecus coquereli) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TOMM40	Translocase of outer mitochondrial membrane 40. (361 aa)
	TOMM40L	Translocase of outer mitochondrial membrane 40 like. (308 aa)
	VDAC2	Voltage dependent anion channel 2. (309 aa)
	VDAC3	Voltage dependent anion channel 3. (284 aa)
	VDAC1	Uncharacterized protein. (283 aa)
	ENSPCOP00000006829	Uncharacterized protein. (252 aa)

Your Current Organism:

Propithecus coquereli

NCBI taxonomy Id: 379532
Other names: P. coquereli, Propithecus verreauxi coquereli

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPCOP00000006829	TOMM40	ENSPCOP00000006829	ENSPCOP00000007658	Uncharacterized protein.	Translocase of outer mitochondrial membrane 40.	0.815
ENSPCOP00000006829	TOMM40L	ENSPCOP00000006829	ENSPCOP00000015743	Uncharacterized protein.	Translocase of outer mitochondrial membrane 40 like.	0.815
ENSPCOP00000006829	VDAC1	ENSPCOP00000006829	ENSPCOP00000019628	Uncharacterized protein.	Uncharacterized protein.	0.545
ENSPCOP00000006829	VDAC2	ENSPCOP00000006829	ENSPCOP00000004108	Uncharacterized protein.	Voltage dependent anion channel 2.	0.981
ENSPCOP00000006829	VDAC3	ENSPCOP00000006829	ENSPCOP00000029893	Uncharacterized protein.	Voltage dependent anion channel 3.	0.967
TOMM40	ENSPCOP00000006829	ENSPCOP00000007658	ENSPCOP00000006829	Translocase of outer mitochondrial membrane 40.	Uncharacterized protein.	0.815
TOMM40	TOMM40L	ENSPCOP00000007658	ENSPCOP00000015743	Translocase of outer mitochondrial membrane 40.	Translocase of outer mitochondrial membrane 40 like.	0.845
TOMM40	VDAC1	ENSPCOP00000007658	ENSPCOP00000019628	Translocase of outer mitochondrial membrane 40.	Uncharacterized protein.	0.815
TOMM40	VDAC2	ENSPCOP00000007658	ENSPCOP00000004108	Translocase of outer mitochondrial membrane 40.	Voltage dependent anion channel 2.	0.815
TOMM40	VDAC3	ENSPCOP00000007658	ENSPCOP00000029893	Translocase of outer mitochondrial membrane 40.	Voltage dependent anion channel 3.	0.815
TOMM40L	ENSPCOP00000006829	ENSPCOP00000015743	ENSPCOP00000006829	Translocase of outer mitochondrial membrane 40 like.	Uncharacterized protein.	0.815
TOMM40L	TOMM40	ENSPCOP00000015743	ENSPCOP00000007658	Translocase of outer mitochondrial membrane 40 like.	Translocase of outer mitochondrial membrane 40.	0.845
TOMM40L	VDAC1	ENSPCOP00000015743	ENSPCOP00000019628	Translocase of outer mitochondrial membrane 40 like.	Uncharacterized protein.	0.815
TOMM40L	VDAC2	ENSPCOP00000015743	ENSPCOP00000004108	Translocase of outer mitochondrial membrane 40 like.	Voltage dependent anion channel 2.	0.815
TOMM40L	VDAC3	ENSPCOP00000015743	ENSPCOP00000029893	Translocase of outer mitochondrial membrane 40 like.	Voltage dependent anion channel 3.	0.815
VDAC1	ENSPCOP00000006829	ENSPCOP00000019628	ENSPCOP00000006829	Uncharacterized protein.	Uncharacterized protein.	0.545
VDAC1	TOMM40	ENSPCOP00000019628	ENSPCOP00000007658	Uncharacterized protein.	Translocase of outer mitochondrial membrane 40.	0.815
VDAC1	TOMM40L	ENSPCOP00000019628	ENSPCOP00000015743	Uncharacterized protein.	Translocase of outer mitochondrial membrane 40 like.	0.815
VDAC1	VDAC2	ENSPCOP00000019628	ENSPCOP00000004108	Uncharacterized protein.	Voltage dependent anion channel 2.	0.981
VDAC1	VDAC3	ENSPCOP00000019628	ENSPCOP00000029893	Uncharacterized protein.	Voltage dependent anion channel 3.	0.966