STRINGSTRING
PARN PARN EXOSC9 EXOSC9 TUT4 TUT4 XRN1 XRN1 WDR82 WDR82 EXOSC10 EXOSC10 LOC105825726 LOC105825726 TENT4B TENT4B DIS3L DIS3L ZC3H12A ZC3H12A LOC105809759 LOC105809759 LIN28B LIN28B ZC3H4 ZC3H4 ERN2 ERN2 EXOSC2 EXOSC2 ENSPCOP00000012386 ENSPCOP00000012386 MTREX MTREX EXOSC8 EXOSC8 POP1 POP1 ENSPCOP00000015413 ENSPCOP00000015413 LOC105826030 LOC105826030 EXOSC5 EXOSC5 EXOSC4 EXOSC4 ENSPCOP00000021398 ENSPCOP00000021398 DICER1 DICER1 EXOSC7 EXOSC7 DIS3 DIS3 DIS3L2 DIS3L2 LIN28A LIN28A TRIR TRIR EXOSC3 EXOSC3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PARNPoly(A)-specific ribonuclease. (623 aa)
EXOSC9Exosome component 9. (440 aa)
TUT4Terminal uridylyl transferase 4. (1593 aa)
XRN15'-3' exoribonuclease 1. (1706 aa)
WDR82WD repeat domain 82. (313 aa)
EXOSC10Exosome component 10. (878 aa)
LOC105825726Nudix hydrolase domain-containing protein. (195 aa)
TENT4BTerminal nucleotidyltransferase 4B. (607 aa)
DIS3LDIS3 like exosome 3'-5' exoribonuclease; Belongs to the RNR ribonuclease family. (1019 aa)
ZC3H12AZinc finger CCCH-type containing 12A. (598 aa)
LOC105809759CCHC-type domain-containing protein. (176 aa)
LIN28BLin-28 homolog B. (258 aa)
ZC3H4Zinc finger CCCH-type containing 4. (1306 aa)
ERN2Endoplasmic reticulum to nucleus signaling 2. (905 aa)
EXOSC2Exosome component 2. (293 aa)
ENSPCOP00000012386Uncharacterized protein. (205 aa)
MTREXMtr4 exosome RNA helicase. (952 aa)
EXOSC8Exosome component 8. (287 aa)
POP1POP1 homolog, ribonuclease P/MRP subunit. (1020 aa)
ENSPCOP00000015413CCHC-type domain-containing protein. (191 aa)
LOC105826030Nudix hydrolase domain-containing protein. (195 aa)
EXOSC5Exosome component 5. (235 aa)
EXOSC4Exosome component 4. (245 aa)
ENSPCOP00000021398RRM domain-containing protein. (83 aa)
DICER1Dicer 1, ribonuclease III; Belongs to the helicase family. Dicer subfamily. (1922 aa)
EXOSC7Exosome component 7. (272 aa)
DIS3DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease; Belongs to the RNR ribonuclease family. (888 aa)
DIS3L2DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of both mRNAs and miRNAs that have been polyuridylated by a terminal uridylyltransferase, such as ZCCHC11/TUT4. Mediates degradation of cytoplasmic mRNAs that have been deadenylated and subsequently uridylated at their 3'. Mediates degradation of uridylated pre-let-7 miRNAs, contributing to the maintenance of embryonic stem (ES) cells. Essential for correct mi [...] (883 aa)
LIN28ACCHC-type domain-containing protein. (209 aa)
TRIRTelomerase RNA component interacting RNase. (177 aa)
EXOSC3Exosome component 3. (275 aa)
Your Current Organism:
Propithecus coquereli
NCBI taxonomy Id: 379532
Other names: P. coquereli, Propithecus verreauxi coquereli
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