30 items (Propithecus coquereli) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SHC1	SHC adaptor protein 1. (582 aa)
	ENSPCOP00000030477	PDZ domain-containing protein. (263 aa)
	EFNA5	Ephrin A5; Belongs to the ephrin family. (228 aa)
	SIPA1L1	Signal induced proliferation associated 1 like 1. (1802 aa)
	SDCBP	Uncharacterized protein. (298 aa)
	CDK5	Cyclin dependent kinase 5; Belongs to the protein kinase superfamily. (292 aa)
	LYN	Tyrosine-protein kinase. (512 aa)
	FYN	Tyrosine-protein kinase. (537 aa)
	NCK1	Cytoplasmic protein. (377 aa)
	CDK5R1	Cyclin-dependent kinase 5 activator. (306 aa)
	EFNB2	Ephrin B2; Belongs to the ephrin family. (335 aa)
	LOC105826870	Uncharacterized protein. (244 aa)
	SRC	Tyrosine-protein kinase. (543 aa)
	CRK	CRK proto-oncogene, adaptor protein. (304 aa)
	AQP1	Uncharacterized protein; Belongs to the MIP/aquaporin (TC 1.A.8) family. (269 aa)
	PTPN1	Tyrosine-protein phosphatase non-receptor type. (435 aa)
	LOC105822409	Eph LBD domain-containing protein. (279 aa)
	ENSPCOP00000011171	Uncharacterized protein. (575 aa)
	CBL	Cbl proto-oncogene. (891 aa)
	CHN1	Chimaerin; GTPase-activating protein for p21-rac. (459 aa)
	EFNA2	Ephrin A2; Belongs to the ephrin family. (211 aa)
	EFNA1	Ephrin A1; Belongs to the ephrin family. (205 aa)
	ANKS1A	Ankyrin repeat and sterile alpha motif domain containing 1A. (1131 aa)
	EFNA4	Ephrin A4; Belongs to the ephrin family. (201 aa)
	GRB2	Growth factor receptor bound protein 2. (217 aa)
	ANKS1B	Ankyrin repeat and sterile alpha motif domain containing 1B. (1248 aa)
	EFNB3	Ephrin B3; Belongs to the ephrin family. (343 aa)
	PIK3CG	Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma; Belongs to the PI3/PI4-kinase family. (1102 aa)
	EFNB1	Ephrin B1; Belongs to the ephrin family. (346 aa)
	EFNA3	Ephrin RBD domain-containing protein; Belongs to the ephrin family. (238 aa)

Your Current Organism:

Propithecus coquereli

NCBI taxonomy Id: 379532
Other names: P. coquereli, Propithecus verreauxi coquereli

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ANKS1A	GRB2	ENSPCOP00000018276	ENSPCOP00000017791	Ankyrin repeat and sterile alpha motif domain containing 1A.	Growth factor receptor bound protein 2.	0.420
ANKS1B	GRB2	ENSPCOP00000017594	ENSPCOP00000017791	Ankyrin repeat and sterile alpha motif domain containing 1B.	Growth factor receptor bound protein 2.	0.420
CBL	CRK	ENSPCOP00000011827	ENSPCOP00000018350	Cbl proto-oncogene.	CRK proto-oncogene, adaptor protein.	0.995
CBL	ENSPCOP00000011171	ENSPCOP00000011827	ENSPCOP00000011171	Cbl proto-oncogene.	Uncharacterized protein.	0.536
CBL	FYN	ENSPCOP00000011827	ENSPCOP00000008529	Cbl proto-oncogene.	Tyrosine-protein kinase.	0.989
CBL	GRB2	ENSPCOP00000011827	ENSPCOP00000017791	Cbl proto-oncogene.	Growth factor receptor bound protein 2.	0.998
CBL	LOC105822409	ENSPCOP00000011827	ENSPCOP00000009486	Cbl proto-oncogene.	Eph LBD domain-containing protein.	0.536
CBL	LYN	ENSPCOP00000011827	ENSPCOP00000024889	Cbl proto-oncogene.	Tyrosine-protein kinase.	0.980
CBL	NCK1	ENSPCOP00000011827	ENSPCOP00000001368	Cbl proto-oncogene.	Cytoplasmic protein.	0.940
CBL	PIK3CG	ENSPCOP00000011827	ENSPCOP00000015902	Cbl proto-oncogene.	Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma; Belongs to the PI3/PI4-kinase family.	0.696
CBL	PTPN1	ENSPCOP00000011827	ENSPCOP00000009086	Cbl proto-oncogene.	Tyrosine-protein phosphatase non-receptor type.	0.511
CBL	SHC1	ENSPCOP00000011827	ENSPCOP00000031654	Cbl proto-oncogene.	SHC adaptor protein 1.	0.973
CBL	SRC	ENSPCOP00000011827	ENSPCOP00000018583	Cbl proto-oncogene.	Tyrosine-protein kinase.	0.982
CDK5	CDK5R1	ENSPCOP00000026355	ENSPCOP00000000683	Cyclin dependent kinase 5; Belongs to the protein kinase superfamily.	Cyclin-dependent kinase 5 activator.	0.999
CDK5	ENSPCOP00000011171	ENSPCOP00000026355	ENSPCOP00000011171	Cyclin dependent kinase 5; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.430
CDK5	FYN	ENSPCOP00000026355	ENSPCOP00000008529	Cyclin dependent kinase 5; Belongs to the protein kinase superfamily.	Tyrosine-protein kinase.	0.892
CDK5	LOC105822409	ENSPCOP00000026355	ENSPCOP00000009486	Cyclin dependent kinase 5; Belongs to the protein kinase superfamily.	Eph LBD domain-containing protein.	0.430
CDK5	LYN	ENSPCOP00000026355	ENSPCOP00000024889	Cyclin dependent kinase 5; Belongs to the protein kinase superfamily.	Tyrosine-protein kinase.	0.600
CDK5	SRC	ENSPCOP00000026355	ENSPCOP00000018583	Cyclin dependent kinase 5; Belongs to the protein kinase superfamily.	Tyrosine-protein kinase.	0.621
CDK5R1	CDK5	ENSPCOP00000000683	ENSPCOP00000026355	Cyclin-dependent kinase 5 activator.	Cyclin dependent kinase 5; Belongs to the protein kinase superfamily.	0.999