(14 nodes) Potassium channel, inwardly rectifying, Kir network (Propithecus coquereli)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	KCNJ6	Potassium voltage-gated channel subfamily J member 6. (423 aa)
	KCNJ1	Potassium voltage-gated channel subfamily J member 1. (392 aa)
	KCNJ8	Potassium voltage-gated channel subfamily J member 8. (424 aa)
	KCNJ2	Potassium voltage-gated channel subfamily J member 2. (427 aa)
	KCNJ15	Potassium voltage-gated channel subfamily J member 15. (376 aa)
	KCNJ16	Potassium voltage-gated channel subfamily J member 16. (462 aa)
	KCNJ3	Potassium voltage-gated channel subfamily J member 3. (501 aa)
	ENSPCOP00000016688	IRK domain-containing protein. (169 aa)
	KCNJ13	Potassium voltage-gated channel subfamily J member 13. (360 aa)
	KCNJ5	Potassium voltage-gated channel subfamily J member 5. (419 aa)
	KCNJ14	Potassium voltage-gated channel subfamily J member 14. (434 aa)
	KCNJ9	Potassium voltage-gated channel subfamily J member 9. (393 aa)
	KCNJ4	Potassium voltage-gated channel subfamily J member 4. (444 aa)
	KCNJ11	Potassium voltage-gated channel subfamily J member 11. (390 aa)

Your Current Organism:

Propithecus coquereli

NCBI taxonomy Id: 379532
Other names: P. coquereli, Propithecus verreauxi coquereli

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPCOP00000016688	KCNJ1	ENSPCOP00000016688	ENSPCOP00000030311	IRK domain-containing protein.	Potassium voltage-gated channel subfamily J member 1.	0.594
ENSPCOP00000016688	KCNJ11	ENSPCOP00000016688	ENSPCOP00000002973	IRK domain-containing protein.	Potassium voltage-gated channel subfamily J member 11.	0.454
ENSPCOP00000016688	KCNJ16	ENSPCOP00000016688	ENSPCOP00000026358	IRK domain-containing protein.	Potassium voltage-gated channel subfamily J member 16.	0.831
ENSPCOP00000016688	KCNJ2	ENSPCOP00000016688	ENSPCOP00000027974	IRK domain-containing protein.	Potassium voltage-gated channel subfamily J member 2.	0.690
ENSPCOP00000016688	KCNJ3	ENSPCOP00000016688	ENSPCOP00000022674	IRK domain-containing protein.	Potassium voltage-gated channel subfamily J member 3.	0.682
ENSPCOP00000016688	KCNJ4	ENSPCOP00000016688	ENSPCOP00000003045	IRK domain-containing protein.	Potassium voltage-gated channel subfamily J member 4.	0.688
ENSPCOP00000016688	KCNJ5	ENSPCOP00000016688	ENSPCOP00000012315	IRK domain-containing protein.	Potassium voltage-gated channel subfamily J member 5.	0.680
ENSPCOP00000016688	KCNJ6	ENSPCOP00000016688	ENSPCOP00000026948	IRK domain-containing protein.	Potassium voltage-gated channel subfamily J member 6.	0.569
ENSPCOP00000016688	KCNJ8	ENSPCOP00000016688	ENSPCOP00000029588	IRK domain-containing protein.	Potassium voltage-gated channel subfamily J member 8.	0.454
ENSPCOP00000016688	KCNJ9	ENSPCOP00000016688	ENSPCOP00000011697	IRK domain-containing protein.	Potassium voltage-gated channel subfamily J member 9.	0.569
KCNJ1	ENSPCOP00000016688	ENSPCOP00000030311	ENSPCOP00000016688	Potassium voltage-gated channel subfamily J member 1.	IRK domain-containing protein.	0.594
KCNJ1	KCNJ15	ENSPCOP00000030311	ENSPCOP00000027222	Potassium voltage-gated channel subfamily J member 1.	Potassium voltage-gated channel subfamily J member 15.	0.609
KCNJ1	KCNJ16	ENSPCOP00000030311	ENSPCOP00000026358	Potassium voltage-gated channel subfamily J member 1.	Potassium voltage-gated channel subfamily J member 16.	0.721
KCNJ11	ENSPCOP00000016688	ENSPCOP00000002973	ENSPCOP00000016688	Potassium voltage-gated channel subfamily J member 11.	IRK domain-containing protein.	0.454
KCNJ11	KCNJ14	ENSPCOP00000002973	ENSPCOP00000012288	Potassium voltage-gated channel subfamily J member 11.	Potassium voltage-gated channel subfamily J member 14.	0.518
KCNJ11	KCNJ15	ENSPCOP00000002973	ENSPCOP00000027222	Potassium voltage-gated channel subfamily J member 11.	Potassium voltage-gated channel subfamily J member 15.	0.488
KCNJ11	KCNJ16	ENSPCOP00000002973	ENSPCOP00000026358	Potassium voltage-gated channel subfamily J member 11.	Potassium voltage-gated channel subfamily J member 16.	0.484
KCNJ11	KCNJ8	ENSPCOP00000002973	ENSPCOP00000029588	Potassium voltage-gated channel subfamily J member 11.	Potassium voltage-gated channel subfamily J member 8.	0.672
KCNJ14	KCNJ11	ENSPCOP00000012288	ENSPCOP00000002973	Potassium voltage-gated channel subfamily J member 14.	Potassium voltage-gated channel subfamily J member 11.	0.518
KCNJ14	KCNJ2	ENSPCOP00000012288	ENSPCOP00000027974	Potassium voltage-gated channel subfamily J member 14.	Potassium voltage-gated channel subfamily J member 2.	0.846