(12 nodes) v-SNARE, coiled-coil homology domain network (Propithecus coquereli)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	VAMP7	Vesicle associated membrane protein 7; Belongs to the synaptobrevin family. (220 aa)
	VAMP4	Vesicle associated membrane protein 4. (141 aa)
	ENSPCOP00000002004	V-SNARE coiled-coil homology domain-containing protein. (101 aa)
	VAMP3	V-SNARE coiled-coil homology domain-containing protein. (104 aa)
	YKT6	YKT6 v-SNARE homolog; Belongs to the synaptobrevin family. (198 aa)
	STXBP5L	Syntaxin binding protein 5 like. (1175 aa)
	VAMP1	Vesicle associated membrane protein 1. (118 aa)
	VAMP8	Vesicle associated membrane protein 8. (100 aa)
	SEC22B	SEC22 homolog B, vesicle trafficking protein (gene/pseudogene); Belongs to the synaptobrevin family. (215 aa)
	STXBP6	Syntaxin binding protein 6. (210 aa)
	VAMP5	Vesicle associated membrane protein 5. (125 aa)
	VAMP2	V-SNARE coiled-coil homology domain-containing protein. (118 aa)

Your Current Organism:

Propithecus coquereli

NCBI taxonomy Id: 379532
Other names: P. coquereli, Propithecus verreauxi coquereli

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPCOP00000002004	SEC22B	ENSPCOP00000002004	ENSPCOP00000006187	V-SNARE coiled-coil homology domain-containing protein.	SEC22 homolog B, vesicle trafficking protein (gene/pseudogene); Belongs to the synaptobrevin family.	0.427
ENSPCOP00000002004	VAMP1	ENSPCOP00000002004	ENSPCOP00000025310	V-SNARE coiled-coil homology domain-containing protein.	Vesicle associated membrane protein 1.	0.914
ENSPCOP00000002004	VAMP2	ENSPCOP00000002004	ENSPCOP00000003915	V-SNARE coiled-coil homology domain-containing protein.	V-SNARE coiled-coil homology domain-containing protein.	0.914
ENSPCOP00000002004	VAMP3	ENSPCOP00000002004	ENSPCOP00000006775	V-SNARE coiled-coil homology domain-containing protein.	V-SNARE coiled-coil homology domain-containing protein.	0.756
ENSPCOP00000002004	VAMP7	ENSPCOP00000002004	ENSPCOP00000004321	V-SNARE coiled-coil homology domain-containing protein.	Vesicle associated membrane protein 7; Belongs to the synaptobrevin family.	0.777
ENSPCOP00000002004	VAMP8	ENSPCOP00000002004	ENSPCOP00000026690	V-SNARE coiled-coil homology domain-containing protein.	Vesicle associated membrane protein 8.	0.817
ENSPCOP00000002004	YKT6	ENSPCOP00000002004	ENSPCOP00000010590	V-SNARE coiled-coil homology domain-containing protein.	YKT6 v-SNARE homolog; Belongs to the synaptobrevin family.	0.665
SEC22B	ENSPCOP00000002004	ENSPCOP00000006187	ENSPCOP00000002004	SEC22 homolog B, vesicle trafficking protein (gene/pseudogene); Belongs to the synaptobrevin family.	V-SNARE coiled-coil homology domain-containing protein.	0.427
SEC22B	VAMP1	ENSPCOP00000006187	ENSPCOP00000025310	SEC22 homolog B, vesicle trafficking protein (gene/pseudogene); Belongs to the synaptobrevin family.	Vesicle associated membrane protein 1.	0.431
SEC22B	VAMP2	ENSPCOP00000006187	ENSPCOP00000003915	SEC22 homolog B, vesicle trafficking protein (gene/pseudogene); Belongs to the synaptobrevin family.	V-SNARE coiled-coil homology domain-containing protein.	0.431
SEC22B	VAMP3	ENSPCOP00000006187	ENSPCOP00000006775	SEC22 homolog B, vesicle trafficking protein (gene/pseudogene); Belongs to the synaptobrevin family.	V-SNARE coiled-coil homology domain-containing protein.	0.481
SEC22B	VAMP4	ENSPCOP00000006187	ENSPCOP00000004466	SEC22 homolog B, vesicle trafficking protein (gene/pseudogene); Belongs to the synaptobrevin family.	Vesicle associated membrane protein 4.	0.437
SEC22B	VAMP7	ENSPCOP00000006187	ENSPCOP00000004321	SEC22 homolog B, vesicle trafficking protein (gene/pseudogene); Belongs to the synaptobrevin family.	Vesicle associated membrane protein 7; Belongs to the synaptobrevin family.	0.566
SEC22B	VAMP8	ENSPCOP00000006187	ENSPCOP00000026690	SEC22 homolog B, vesicle trafficking protein (gene/pseudogene); Belongs to the synaptobrevin family.	Vesicle associated membrane protein 8.	0.597
SEC22B	YKT6	ENSPCOP00000006187	ENSPCOP00000010590	SEC22 homolog B, vesicle trafficking protein (gene/pseudogene); Belongs to the synaptobrevin family.	YKT6 v-SNARE homolog; Belongs to the synaptobrevin family.	0.989
STXBP5L	VAMP7	ENSPCOP00000014506	ENSPCOP00000004321	Syntaxin binding protein 5 like.	Vesicle associated membrane protein 7; Belongs to the synaptobrevin family.	0.510
STXBP6	VAMP7	ENSPCOP00000002434	ENSPCOP00000004321	Syntaxin binding protein 6.	Vesicle associated membrane protein 7; Belongs to the synaptobrevin family.	0.480
STXBP6	VAMP8	ENSPCOP00000002434	ENSPCOP00000026690	Syntaxin binding protein 6.	Vesicle associated membrane protein 8.	0.448
VAMP1	ENSPCOP00000002004	ENSPCOP00000025310	ENSPCOP00000002004	Vesicle associated membrane protein 1.	V-SNARE coiled-coil homology domain-containing protein.	0.914
VAMP1	SEC22B	ENSPCOP00000025310	ENSPCOP00000006187	Vesicle associated membrane protein 1.	SEC22 homolog B, vesicle trafficking protein (gene/pseudogene); Belongs to the synaptobrevin family.	0.431