STRINGSTRING
POLD2 POLD2 MEIOB MEIOB MUTYH MUTYH RCBTB1 RCBTB1 POLD4 POLD4 RPA1 RPA1 REC114 REC114 PARP2 PARP2 POLD3 POLD3 VWA5B2 VWA5B2 XRCC1 XRCC1 LIG3 LIG3 POLB POLB UNG UNG RFC1 RFC1 OGG1 OGG1 RFC2 RFC2 POLE2 POLE2 POLE3 POLE3 NEIL1 NEIL1 LIG1 LIG1 ATAD5 ATAD5 MBD4 MBD4 MPG MPG POLE POLE POLD1 POLD1 NTHL1 NTHL1 PARG PARG RFC3 RFC3 LOC105820527 LOC105820527 RFC4 RFC4 RFC5 RFC5 PNKP PNKP POLE4 POLE4 PARP1 PARP1 SMUG1 SMUG1 APEX2 APEX2 PCNA PCNA ENSPCOP00000008190 ENSPCOP00000008190 ADPRHL2 ADPRHL2 ENSPCOP00000007843 ENSPCOP00000007843 PARP3 PARP3 FEN1 FEN1 LOC105824103 LOC105824103 APEX1 APEX1 TDG TDG RCBTB2 RCBTB2 RPA3 RPA3 VWA5B1 VWA5B1 NEIL2 NEIL2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
POLD2DNA polymerase delta 2, accessory subunit. (504 aa)
MEIOBMeiosis specific with OB-fold. (289 aa)
MUTYHAdenine DNA glycosylase; Adenine glycosylase active on G-A mispairs. (549 aa)
RCBTB1RCC1 and BTB domain containing protein 1. (531 aa)
POLD4Uncharacterized protein. (107 aa)
RPA1Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (616 aa)
REC114REC114 meiotic recombination protein. (235 aa)
PARP2Poly [ADP-ribose] polymerase. (581 aa)
POLD3DNA polymerase delta 3, accessory subunit. (359 aa)
VWA5B2Von Willebrand factor A domain containing 5B2. (1247 aa)
XRCC1X-ray repair cross complementing 1. (598 aa)
LIG3DNA ligase. (966 aa)
POLBDNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity. (333 aa)
UNGUracil DNA glycosylase. (261 aa)
RFC1Replication factor C subunit 1. (1113 aa)
OGG18-oxoguanine DNA glycosylase. (380 aa)
RFC2Replication factor C subunit 2. (352 aa)
POLE2DNA polymerase epsilon 2, accessory subunit. (439 aa)
POLE3DNA polymerase epsilon 3, accessory subunit. (147 aa)
NEIL1Nei like DNA glycosylase 1. (390 aa)
LIG1DNA ligase. (916 aa)
ATAD5ATPase family AAA domain containing 5. (1646 aa)
MBD4Uncharacterized protein. (108 aa)
MPGN-methylpurine DNA glycosylase. (284 aa)
POLEDNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2284 aa)
POLD1DNA polymerase. (1125 aa)
NTHL1Endonuclease III-like protein 1; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines. (312 aa)
PARGPoly(ADP-ribose) glycohydrolase. (970 aa)
RFC3Replication factor C subunit 3. (356 aa)
LOC105820527Uncharacterized protein. (247 aa)
RFC4Replication factor C subunit 4. (365 aa)
RFC5AAA domain-containing protein. (338 aa)
PNKPPolynucleotide kinase 3'-phosphatase. (521 aa)
POLE4DNA polymerase epsilon 4, accessory subunit. (118 aa)
PARP1Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair. (1014 aa)
SMUG1Uncharacterized protein. (272 aa)
APEX2DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends. (518 aa)
PCNAProliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (261 aa)
ENSPCOP00000008190AAA domain-containing protein. (331 aa)
ADPRHL2ADP-ribosylhydrolase like 2. (365 aa)
ENSPCOP00000007843Uncharacterized protein. (432 aa)
PARP3Poly [ADP-ribose] polymerase. (520 aa)
FEN1Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] (380 aa)
LOC105824103Uncharacterized protein. (430 aa)
APEX1DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends. (318 aa)
TDGThymine DNA glycosylase. (256 aa)
RCBTB2RCC1 and BTB domain containing protein 2. (551 aa)
RPA3Replication protein A3. (107 aa)
VWA5B1Von Willebrand factor A domain containing 5B1. (1212 aa)
NEIL2Nei like DNA glycosylase 2. (217 aa)
Your Current Organism:
Propithecus coquereli
NCBI taxonomy Id: 379532
Other names: P. coquereli, Propithecus verreauxi coquereli
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