40 items (Propithecus coquereli) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LRRC7	Leucine rich repeat containing 7. (1489 aa)
	DLG4	Uncharacterized protein; Belongs to the MAGUK family. (602 aa)
	DLG2	Discs large MAGUK scaffold protein 2. (975 aa)
	TUBA8	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (482 aa)
	DLG1	Discs large MAGUK scaffold protein 1; Belongs to the MAGUK family. (910 aa)
	LIN7B	Protein lin-7 homolog; Plays a role in establishing and maintaining the asymmetric distribution of channels and receptors at the plasma membrane of polarized cells; Belongs to the lin-7 family. (207 aa)
	ENSPCOP00000014002	Uncharacterized protein. (286 aa)
	DLG3	Discs large MAGUK scaffold protein 3; Belongs to the MAGUK family. (849 aa)
	NEFL	Neurofilament light; Belongs to the intermediate filament family. (545 aa)
	GRIN2B	Glutamate ionotropic receptor NMDA type subunit 2B. (1485 aa)
	CASK	Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family. (915 aa)
	CAMK2A	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (471 aa)
	TUBA4A	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (448 aa)
	TUBA1C	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (519 aa)
	ENSPCOP00000023082	Uncharacterized protein. (308 aa)
	LIN7C	Protein lin-7 homolog; Plays a role in establishing and maintaining the asymmetric distribution of channels and receptors at the plasma membrane of polarized cells; Belongs to the lin-7 family. (197 aa)
	ENSPCOP00000021889	Tubulin domain-containing protein. (90 aa)
	ENSPCOP00000021805	Tubulin_C domain-containing protein; Belongs to the tubulin family. (208 aa)
	CAMK2D	Calcium/calmodulin dependent protein kinase II delta. (503 aa)
	TUBB	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (444 aa)
	GRIN1	Glutamate ionotropic receptor NMDA type subunit 1. (960 aa)
	TUBB4B	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (445 aa)
	APBA1	Amyloid beta precursor protein binding family A member 1. (836 aa)
	LRBA	LPS responsive beige-like anchor protein. (2750 aa)
	GRIN2A	Glutamate ionotropic receptor NMDA type subunit 2A. (1462 aa)
	TUBB1	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (450 aa)
	GRIN2C	Glutamate ionotropic receptor NMDA type subunit 2C. (1234 aa)
	GRIN3A	Glutamate ionotropic receptor NMDA type subunit 3A; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family. (1115 aa)
	GRIN2D	Glutamate ionotropic receptor NMDA type subunit 2D. (1337 aa)
	PAPLN	Papilin, proteoglycan like sulfated glycoprotein. (1260 aa)
	LIN7A	Protein lin-7 homolog; Plays a role in establishing and maintaining the asymmetric distribution of channels and receptors at the plasma membrane of polarized cells; Belongs to the lin-7 family. (233 aa)
	TUBAL3	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (445 aa)
	LOC105820645	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (450 aa)
	TUBA1A	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (451 aa)
	LOC105815498	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (450 aa)
	LOC105806750	Uncharacterized protein. (261 aa)
	CAMK2B	Calcium/calmodulin dependent protein kinase II beta. (665 aa)
	TUBB2A	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family. (273 aa)
	LOC105810122	Uncharacterized protein. (658 aa)
	KIF17	Kinesin family member 17; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1029 aa)

Your Current Organism:

Propithecus coquereli

NCBI taxonomy Id: 379532
Other names: P. coquereli, Propithecus verreauxi coquereli

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APBA1	CAMK2A	ENSPCOP00000018346	ENSPCOP00000025158	Amyloid beta precursor protein binding family A member 1.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.874
APBA1	CAMK2B	ENSPCOP00000018346	ENSPCOP00000007426	Amyloid beta precursor protein binding family A member 1.	Calcium/calmodulin dependent protein kinase II beta.	0.874
APBA1	CAMK2D	ENSPCOP00000018346	ENSPCOP00000021794	Amyloid beta precursor protein binding family A member 1.	Calcium/calmodulin dependent protein kinase II delta.	0.874
APBA1	CASK	ENSPCOP00000018346	ENSPCOP00000026073	Amyloid beta precursor protein binding family A member 1.	Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.	0.999
APBA1	DLG1	ENSPCOP00000018346	ENSPCOP00000015085	Amyloid beta precursor protein binding family A member 1.	Discs large MAGUK scaffold protein 1; Belongs to the MAGUK family.	0.639
APBA1	DLG2	ENSPCOP00000018346	ENSPCOP00000016440	Amyloid beta precursor protein binding family A member 1.	Discs large MAGUK scaffold protein 2.	0.639
APBA1	DLG3	ENSPCOP00000018346	ENSPCOP00000015024	Amyloid beta precursor protein binding family A member 1.	Discs large MAGUK scaffold protein 3; Belongs to the MAGUK family.	0.634
APBA1	DLG4	ENSPCOP00000018346	ENSPCOP00000017112	Amyloid beta precursor protein binding family A member 1.	Uncharacterized protein; Belongs to the MAGUK family.	0.634
APBA1	ENSPCOP00000014002	ENSPCOP00000018346	ENSPCOP00000014002	Amyloid beta precursor protein binding family A member 1.	Uncharacterized protein.	0.634
APBA1	GRIN1	ENSPCOP00000018346	ENSPCOP00000020507	Amyloid beta precursor protein binding family A member 1.	Glutamate ionotropic receptor NMDA type subunit 1.	0.422
APBA1	GRIN2B	ENSPCOP00000018346	ENSPCOP00000026802	Amyloid beta precursor protein binding family A member 1.	Glutamate ionotropic receptor NMDA type subunit 2B.	0.585
APBA1	KIF17	ENSPCOP00000018346	ENSPCOP00000011485	Amyloid beta precursor protein binding family A member 1.	Kinesin family member 17; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.719
APBA1	LIN7A	ENSPCOP00000018346	ENSPCOP00000004016	Amyloid beta precursor protein binding family A member 1.	Protein lin-7 homolog; Plays a role in establishing and maintaining the asymmetric distribution of channels and receptors at the plasma membrane of polarized cells; Belongs to the lin-7 family.	0.908
APBA1	LIN7B	ENSPCOP00000018346	ENSPCOP00000015040	Amyloid beta precursor protein binding family A member 1.	Protein lin-7 homolog; Plays a role in establishing and maintaining the asymmetric distribution of channels and receptors at the plasma membrane of polarized cells; Belongs to the lin-7 family.	0.877
APBA1	LIN7C	ENSPCOP00000018346	ENSPCOP00000022308	Amyloid beta precursor protein binding family A member 1.	Protein lin-7 homolog; Plays a role in establishing and maintaining the asymmetric distribution of channels and receptors at the plasma membrane of polarized cells; Belongs to the lin-7 family.	0.907
APBA1	LOC105806750	ENSPCOP00000018346	ENSPCOP00000007251	Amyloid beta precursor protein binding family A member 1.	Uncharacterized protein.	0.634
CAMK2A	APBA1	ENSPCOP00000025158	ENSPCOP00000018346	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Amyloid beta precursor protein binding family A member 1.	0.874
CAMK2A	CAMK2B	ENSPCOP00000025158	ENSPCOP00000007426	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Calcium/calmodulin dependent protein kinase II beta.	0.995
CAMK2A	CAMK2D	ENSPCOP00000025158	ENSPCOP00000021794	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Calcium/calmodulin dependent protein kinase II delta.	0.994
CAMK2A	CASK	ENSPCOP00000025158	ENSPCOP00000026073	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.	0.576