(24 nodes) Endosomal Sorting Complex Required For Transport (ESCRT), and Sealing of the nuclear envelope (NE) by ESCRT-III network (Aspergillus niger)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	G3XMV4_ASPNA	Uncharacterized protein. (583 aa)
	G3XNC3_ASPNA	GLUE N-terminal domain-containing protein. (527 aa)
	G3XNF7_ASPNA	Uncharacterized protein. (227 aa)
	G3XNI8_ASPNA	Uncharacterized protein. (228 aa)
	G3XNJ6_ASPNA	Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family. (262 aa)
	G3XQN5_ASPNA	Uncharacterized protein; Belongs to the VPS28 family. (853 aa)
	G3XR62_ASPNA	Uncharacterized protein. (113 aa)
	G3XS47_ASPNA	Uncharacterized protein. (402 aa)
	G3XT10_ASPNA	Uncharacterized protein. (193 aa)
	G3Y253_ASPNA	MPN domain-containing protein. (549 aa)
	G3Y5Q9_ASPNA	Uncharacterized protein; Belongs to the AAA ATPase family. (434 aa)
	G3Y9E5_ASPNA	Uncharacterized protein. (216 aa)
	palA	PalA, pH signal transduction protein. (822 aa)
	G3YAC7_ASPNA	Uncharacterized protein. (455 aa)
	G3YC34_ASPNA	Uncharacterized protein. (733 aa)
	G3YCB1_ASPNA	Uncharacterized protein. (384 aa)
	G3YCT0_ASPNA	Uncharacterized protein. (577 aa)
	G3YCT8_ASPNA	USP domain-containing protein. (374 aa)
	G3YEC4_ASPNA	Uncharacterized protein. (243 aa)
	G3YEQ7_ASPNA	Uncharacterized protein. (315 aa)
	G3YFH0_ASPNA	Uncharacterized protein. (207 aa)
	G3YFM2_ASPNA	Uncharacterized protein. (219 aa)
	G3YFW5_ASPNA	AAA domain-containing protein; Belongs to the AAA ATPase family. (756 aa)
	G3YHK1_ASPNA	AN1-type domain-containing protein. (72 aa)

Your Current Organism:

Aspergillus niger

NCBI taxonomy Id: 380704
Other names: A. niger ATCC 1015, Aspergillus niger ATCC 1015

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G3XMV4_ASPNA	G3XNC3_ASPNA	G3XMV4	G3XNC3	Uncharacterized protein.	GLUE N-terminal domain-containing protein.	0.965
G3XMV4_ASPNA	G3XNF7_ASPNA	G3XMV4	G3XNF7	Uncharacterized protein.	Uncharacterized protein.	0.853
G3XMV4_ASPNA	G3XNI8_ASPNA	G3XMV4	G3XNI8	Uncharacterized protein.	Uncharacterized protein.	0.849
G3XMV4_ASPNA	G3XNJ6_ASPNA	G3XMV4	G3XNJ6	Uncharacterized protein.	Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family.	0.891
G3XMV4_ASPNA	G3XQN5_ASPNA	G3XMV4	G3XQN5	Uncharacterized protein.	Uncharacterized protein; Belongs to the VPS28 family.	0.998
G3XMV4_ASPNA	G3XR62_ASPNA	G3XMV4	G3XR62	Uncharacterized protein.	Uncharacterized protein.	0.662
G3XMV4_ASPNA	G3XS47_ASPNA	G3XMV4	G3XS47	Uncharacterized protein.	Uncharacterized protein.	0.747
G3XMV4_ASPNA	G3XT10_ASPNA	G3XMV4	G3XT10	Uncharacterized protein.	Uncharacterized protein.	0.886
G3XMV4_ASPNA	G3Y5Q9_ASPNA	G3XMV4	G3Y5Q9	Uncharacterized protein.	Uncharacterized protein; Belongs to the AAA ATPase family.	0.724
G3XMV4_ASPNA	G3Y9E5_ASPNA	G3XMV4	G3Y9E5	Uncharacterized protein.	Uncharacterized protein.	0.660
G3XMV4_ASPNA	G3YAC7_ASPNA	G3XMV4	G3YAC7	Uncharacterized protein.	Uncharacterized protein.	0.785
G3XMV4_ASPNA	G3YCB1_ASPNA	G3XMV4	G3YCB1	Uncharacterized protein.	Uncharacterized protein.	0.902
G3XMV4_ASPNA	G3YCT0_ASPNA	G3XMV4	G3YCT0	Uncharacterized protein.	Uncharacterized protein.	0.902
G3XMV4_ASPNA	G3YEC4_ASPNA	G3XMV4	G3YEC4	Uncharacterized protein.	Uncharacterized protein.	0.860
G3XMV4_ASPNA	G3YEQ7_ASPNA	G3XMV4	G3YEQ7	Uncharacterized protein.	Uncharacterized protein.	0.491
G3XMV4_ASPNA	G3YFH0_ASPNA	G3XMV4	G3YFH0	Uncharacterized protein.	Uncharacterized protein.	0.872
G3XMV4_ASPNA	G3YFM2_ASPNA	G3XMV4	G3YFM2	Uncharacterized protein.	Uncharacterized protein.	0.445
G3XMV4_ASPNA	G3YHK1_ASPNA	G3XMV4	G3YHK1	Uncharacterized protein.	AN1-type domain-containing protein.	0.938
G3XMV4_ASPNA	palA	G3XMV4	G3Y9Z5	Uncharacterized protein.	PalA, pH signal transduction protein.	0.926
G3XNC3_ASPNA	G3XMV4_ASPNA	G3XNC3	G3XMV4	GLUE N-terminal domain-containing protein.	Uncharacterized protein.	0.965