15 items (Aspergillus niger) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	G3XRK8_ASPNA	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (200 aa)
	G3XRP2_ASPNA	Ribosomal_S7 domain-containing protein; Belongs to the universal ribosomal protein uS7 family. (215 aa)
	G3XUR9_ASPNA	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. (259 aa)
	G3XZ33_ASPNA	Ribosomal_S10 domain-containing protein. (116 aa)
	G3Y0E6_ASPNA	Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family. (151 aa)
	G3Y3C3_ASPNA	Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family. (150 aa)
	G3Y3D9_ASPNA	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (200 aa)
	G3Y639_ASPNA	Uncharacterized protein. (169 aa)
	G3Y9W9_ASPNA	BZIP domain-containing protein. (254 aa)
	G3YBG1_ASPNA	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (258 aa)
	G3YBH9_ASPNA	40S ribosomal protein S27. (80 aa)
	G3YE37_ASPNA	Uncharacterized protein. (147 aa)
	G3YE88_ASPNA	Uncharacterized protein. (532 aa)
	G3YFJ2_ASPNA	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family. (145 aa)
	G3YFV5_ASPNA	S10_plectin domain-containing protein. (150 aa)

Your Current Organism:

Aspergillus niger

NCBI taxonomy Id: 380704
Other names: A. niger ATCC 1015, Aspergillus niger ATCC 1015

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G3XRK8_ASPNA	G3XRP2_ASPNA	G3XRK8	G3XRP2	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.	Ribosomal_S7 domain-containing protein; Belongs to the universal ribosomal protein uS7 family.	0.999
G3XRK8_ASPNA	G3XUR9_ASPNA	G3XRK8	G3XUR9	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	0.999
G3XRK8_ASPNA	G3XZ33_ASPNA	G3XRK8	G3XZ33	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.	Ribosomal_S10 domain-containing protein.	0.999
G3XRK8_ASPNA	G3Y0E6_ASPNA	G3XRK8	G3Y0E6	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.	Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family.	0.999
G3XRK8_ASPNA	G3Y3C3_ASPNA	G3XRK8	G3Y3C3	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family.	0.999
G3XRK8_ASPNA	G3Y3D9_ASPNA	G3XRK8	G3Y3D9	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.	0.999
G3XRK8_ASPNA	G3Y639_ASPNA	G3XRK8	G3Y639	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.	Uncharacterized protein.	0.999
G3XRK8_ASPNA	G3Y9W9_ASPNA	G3XRK8	G3Y9W9	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.	BZIP domain-containing protein.	0.999
G3XRK8_ASPNA	G3YBG1_ASPNA	G3XRK8	G3YBG1	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.	0.999
G3XRK8_ASPNA	G3YBH9_ASPNA	G3XRK8	G3YBH9	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.	40S ribosomal protein S27.	0.999
G3XRK8_ASPNA	G3YE37_ASPNA	G3XRK8	G3YE37	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.	Uncharacterized protein.	0.999
G3XRK8_ASPNA	G3YE88_ASPNA	G3XRK8	G3YE88	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.	Uncharacterized protein.	0.999
G3XRK8_ASPNA	G3YFJ2_ASPNA	G3XRK8	G3YFJ2	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	0.999
G3XRK8_ASPNA	G3YFV5_ASPNA	G3XRK8	G3YFV5	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.	S10_plectin domain-containing protein.	0.999
G3XRP2_ASPNA	G3XRK8_ASPNA	G3XRP2	G3XRK8	Ribosomal_S7 domain-containing protein; Belongs to the universal ribosomal protein uS7 family.	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.	0.999
G3XRP2_ASPNA	G3XUR9_ASPNA	G3XRP2	G3XUR9	Ribosomal_S7 domain-containing protein; Belongs to the universal ribosomal protein uS7 family.	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	0.999
G3XRP2_ASPNA	G3XZ33_ASPNA	G3XRP2	G3XZ33	Ribosomal_S7 domain-containing protein; Belongs to the universal ribosomal protein uS7 family.	Ribosomal_S10 domain-containing protein.	0.999
G3XRP2_ASPNA	G3Y0E6_ASPNA	G3XRP2	G3Y0E6	Ribosomal_S7 domain-containing protein; Belongs to the universal ribosomal protein uS7 family.	Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family.	0.999
G3XRP2_ASPNA	G3Y3C3_ASPNA	G3XRP2	G3Y3C3	Ribosomal_S7 domain-containing protein; Belongs to the universal ribosomal protein uS7 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family.	0.999
G3XRP2_ASPNA	G3Y3D9_ASPNA	G3XRP2	G3Y3D9	Ribosomal_S7 domain-containing protein; Belongs to the universal ribosomal protein uS7 family.	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.	0.999