35 items (Aspergillus niger) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	G3XLM6_ASPNA	Nucleoside diphosphate kinase. (153 aa)
	G3XLP5_ASPNA	Uncharacterized protein. (201 aa)
	G3XN13_ASPNA	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family. (96 aa)
	G3XP06_ASPNA	Uncharacterized protein. (250 aa)
	G3XPU9_ASPNA	Uncharacterized protein. (505 aa)
	G3XRK3_ASPNA	Ribosomal_S7 domain-containing protein. (351 aa)
	G3XSZ8_ASPNA	Ribosomal_L2_C domain-containing protein. (392 aa)
	G3XTD9_ASPNA	MRP-S28 domain-containing protein. (161 aa)
	G3XXA9_ASPNA	Ribosomal_S10 domain-containing protein. (263 aa)
	G3XXI0_ASPNA	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (317 aa)
	G3XYS8_ASPNA	Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family. (354 aa)
	G3Y0I7_ASPNA	Uncharacterized protein. (145 aa)
	G3Y0V3_ASPNA	Uncharacterized protein; Belongs to the universal ribosomal protein uS15 family. (299 aa)
	G3Y2T3_ASPNA	Ribosomal_L16 domain-containing protein; Belongs to the universal ribosomal protein uL16 family. (213 aa)
	G3Y307_ASPNA	Uncharacterized protein. (192 aa)
	G3Y3B6_ASPNA	Uncharacterized protein. (166 aa)
	G3Y4K4_ASPNA	Ribosomal_L5_C domain-containing protein. (354 aa)
	G3Y7D9_ASPNA	Uncharacterized protein. (89 aa)
	G3Y8S2_ASPNA	Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family. (114 aa)
	G3Y9G9_ASPNA	Uncharacterized protein. (212 aa)
	G3Y9R9_ASPNA	Uncharacterized protein. (185 aa)
	G3Y9V5_ASPNA	Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family. (305 aa)
	G3YAS1_ASPNA	Uncharacterized protein; Belongs to the universal ribosomal protein uL6 family. (253 aa)
	G3YAZ6_ASPNA	Uncharacterized protein. (122 aa)
	G3YDT6_ASPNA	Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family. (153 aa)
	G3YDW3_ASPNA	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. (444 aa)
	G3YEE1_ASPNA	Uncharacterized protein. (370 aa)
	G3YF92_ASPNA	Uncharacterized protein. (84 aa)
	G3YFI9_ASPNA	Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family. (173 aa)
	G3YFN2_ASPNA	Uncharacterized protein. (231 aa)
	G3YFV9_ASPNA	L51_S25_CI-B8 domain-containing protein. (205 aa)
	G3YFZ5_ASPNA	Uncharacterized protein. (235 aa)
	G3YH27_ASPNA	Ribosomal_L18e/L15P domain-containing protein. (317 aa)
	G3YH46_ASPNA	Uncharacterized protein. (121 aa)
	G3YH58_ASPNA	Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (440 aa)

Your Current Organism:

Aspergillus niger

NCBI taxonomy Id: 380704
Other names: A. niger ATCC 1015, Aspergillus niger ATCC 1015

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G3XLM6_ASPNA	G3XLP5_ASPNA	G3XLM6	G3XLP5	Nucleoside diphosphate kinase.	Uncharacterized protein.	0.906
G3XLM6_ASPNA	G3XN13_ASPNA	G3XLM6	G3XN13	Nucleoside diphosphate kinase.	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	0.993
G3XLM6_ASPNA	G3XP06_ASPNA	G3XLM6	G3XP06	Nucleoside diphosphate kinase.	Uncharacterized protein.	0.921
G3XLM6_ASPNA	G3XPU9_ASPNA	G3XLM6	G3XPU9	Nucleoside diphosphate kinase.	Uncharacterized protein.	0.988
G3XLM6_ASPNA	G3XRK3_ASPNA	G3XLM6	G3XRK3	Nucleoside diphosphate kinase.	Ribosomal_S7 domain-containing protein.	0.996
G3XLM6_ASPNA	G3XSZ8_ASPNA	G3XLM6	G3XSZ8	Nucleoside diphosphate kinase.	Ribosomal_L2_C domain-containing protein.	0.872
G3XLM6_ASPNA	G3XTD9_ASPNA	G3XLM6	G3XTD9	Nucleoside diphosphate kinase.	MRP-S28 domain-containing protein.	0.986
G3XLM6_ASPNA	G3XXA9_ASPNA	G3XLM6	G3XXA9	Nucleoside diphosphate kinase.	Ribosomal_S10 domain-containing protein.	0.997
G3XLM6_ASPNA	G3XXI0_ASPNA	G3XLM6	G3XXI0	Nucleoside diphosphate kinase.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.994
G3XLM6_ASPNA	G3XYS8_ASPNA	G3XLM6	G3XYS8	Nucleoside diphosphate kinase.	Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.	0.870
G3XLM6_ASPNA	G3Y0I7_ASPNA	G3XLM6	G3Y0I7	Nucleoside diphosphate kinase.	Uncharacterized protein.	0.842
G3XLM6_ASPNA	G3Y0V3_ASPNA	G3XLM6	G3Y0V3	Nucleoside diphosphate kinase.	Uncharacterized protein; Belongs to the universal ribosomal protein uS15 family.	0.997
G3XLM6_ASPNA	G3Y2T3_ASPNA	G3XLM6	G3Y2T3	Nucleoside diphosphate kinase.	Ribosomal_L16 domain-containing protein; Belongs to the universal ribosomal protein uL16 family.	0.854
G3XLM6_ASPNA	G3Y307_ASPNA	G3XLM6	G3Y307	Nucleoside diphosphate kinase.	Uncharacterized protein.	0.969
G3XLM6_ASPNA	G3Y3B6_ASPNA	G3XLM6	G3Y3B6	Nucleoside diphosphate kinase.	Uncharacterized protein.	0.959
G3XLM6_ASPNA	G3Y4K4_ASPNA	G3XLM6	G3Y4K4	Nucleoside diphosphate kinase.	Ribosomal_L5_C domain-containing protein.	0.731
G3XLM6_ASPNA	G3Y7D9_ASPNA	G3XLM6	G3Y7D9	Nucleoside diphosphate kinase.	Uncharacterized protein.	0.997
G3XLM6_ASPNA	G3Y8S2_ASPNA	G3XLM6	G3Y8S2	Nucleoside diphosphate kinase.	Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.	0.868
G3XLM6_ASPNA	G3Y9G9_ASPNA	G3XLM6	G3Y9G9	Nucleoside diphosphate kinase.	Uncharacterized protein.	0.643
G3XLM6_ASPNA	G3Y9R9_ASPNA	G3XLM6	G3Y9R9	Nucleoside diphosphate kinase.	Uncharacterized protein.	0.838