7 items (Aspergillus niger) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	G3XN13_ASPNA	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family. (96 aa)
	G3XXA9_ASPNA	Ribosomal_S10 domain-containing protein. (263 aa)
	G3Y0V3_ASPNA	Uncharacterized protein; Belongs to the universal ribosomal protein uS15 family. (299 aa)
	G3Y7D9_ASPNA	Uncharacterized protein. (89 aa)
	G3YEE1_ASPNA	Uncharacterized protein. (370 aa)
	G3YFZ5_ASPNA	Uncharacterized protein. (235 aa)
	G3YH46_ASPNA	Uncharacterized protein. (121 aa)

Your Current Organism:

Aspergillus niger

NCBI taxonomy Id: 380704
Other names: A. niger ATCC 1015, Aspergillus niger ATCC 1015

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G3XN13_ASPNA	G3XXA9_ASPNA	G3XN13	G3XXA9	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	Ribosomal_S10 domain-containing protein.	0.999
G3XN13_ASPNA	G3Y0V3_ASPNA	G3XN13	G3Y0V3	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uS15 family.	0.999
G3XN13_ASPNA	G3Y7D9_ASPNA	G3XN13	G3Y7D9	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	Uncharacterized protein.	0.999
G3XN13_ASPNA	G3YEE1_ASPNA	G3XN13	G3YEE1	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	Uncharacterized protein.	0.999
G3XN13_ASPNA	G3YFZ5_ASPNA	G3XN13	G3YFZ5	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	Uncharacterized protein.	0.999
G3XN13_ASPNA	G3YH46_ASPNA	G3XN13	G3YH46	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	Uncharacterized protein.	0.999
G3XXA9_ASPNA	G3XN13_ASPNA	G3XXA9	G3XN13	Ribosomal_S10 domain-containing protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	0.999
G3XXA9_ASPNA	G3Y0V3_ASPNA	G3XXA9	G3Y0V3	Ribosomal_S10 domain-containing protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS15 family.	0.999
G3XXA9_ASPNA	G3Y7D9_ASPNA	G3XXA9	G3Y7D9	Ribosomal_S10 domain-containing protein.	Uncharacterized protein.	0.999
G3XXA9_ASPNA	G3YEE1_ASPNA	G3XXA9	G3YEE1	Ribosomal_S10 domain-containing protein.	Uncharacterized protein.	0.999
G3XXA9_ASPNA	G3YFZ5_ASPNA	G3XXA9	G3YFZ5	Ribosomal_S10 domain-containing protein.	Uncharacterized protein.	0.999
G3XXA9_ASPNA	G3YH46_ASPNA	G3XXA9	G3YH46	Ribosomal_S10 domain-containing protein.	Uncharacterized protein.	0.999
G3Y0V3_ASPNA	G3XN13_ASPNA	G3Y0V3	G3XN13	Uncharacterized protein; Belongs to the universal ribosomal protein uS15 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	0.999
G3Y0V3_ASPNA	G3XXA9_ASPNA	G3Y0V3	G3XXA9	Uncharacterized protein; Belongs to the universal ribosomal protein uS15 family.	Ribosomal_S10 domain-containing protein.	0.999
G3Y0V3_ASPNA	G3Y7D9_ASPNA	G3Y0V3	G3Y7D9	Uncharacterized protein; Belongs to the universal ribosomal protein uS15 family.	Uncharacterized protein.	0.999
G3Y0V3_ASPNA	G3YEE1_ASPNA	G3Y0V3	G3YEE1	Uncharacterized protein; Belongs to the universal ribosomal protein uS15 family.	Uncharacterized protein.	0.999
G3Y0V3_ASPNA	G3YFZ5_ASPNA	G3Y0V3	G3YFZ5	Uncharacterized protein; Belongs to the universal ribosomal protein uS15 family.	Uncharacterized protein.	0.999
G3Y0V3_ASPNA	G3YH46_ASPNA	G3Y0V3	G3YH46	Uncharacterized protein; Belongs to the universal ribosomal protein uS15 family.	Uncharacterized protein.	0.999
G3Y7D9_ASPNA	G3XN13_ASPNA	G3Y7D9	G3XN13	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	0.999
G3Y7D9_ASPNA	G3XXA9_ASPNA	G3Y7D9	G3XXA9	Uncharacterized protein.	Ribosomal_S10 domain-containing protein.	0.999