(17 nodes) Mixed, incl. Prp19 complex, and Generation of catalytic spliceosome for second transesterification step network (Aspergillus niger)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	G3XLH4_ASPNA	SKIP_SNW domain-containing protein. (584 aa)
	G3XNA1_ASPNA	Pre-mRNA-splicing factor; Involved in mRNA splicing where it associates with cdc5 and the other cwf proteins as part of the spliceosome. (1418 aa)
	G3XNU7_ASPNA	RRM domain-containing protein. (350 aa)
	G3XSC0_ASPNA	MI domain-containing protein. (880 aa)
	G3XXL5_ASPNA	Cwf21 domain-containing protein. (143 aa)
	G3XYP1_ASPNA	Uncharacterized protein. (251 aa)
	G3XZJ5_ASPNA	WD_REPEATS_REGION domain-containing protein. (579 aa)
	G3Y1A0_ASPNA	Uncharacterized protein. (288 aa)
	G3Y1Q2_ASPNA	RRM domain-containing protein. (152 aa)
	G3Y4H8_ASPNA	Uncharacterized protein. (408 aa)
	G3Y4U0_ASPNA	Uncharacterized protein. (148 aa)
	G3Y636_ASPNA	Cir_N domain-containing protein. (394 aa)
	G3Y9R6_ASPNA	Uncharacterized protein. (308 aa)
	G3YBG7_ASPNA	Slu7 domain-containing protein. (477 aa)
	G3YDQ1_ASPNA	TPR_REGION domain-containing protein. (850 aa)
	G3YFH2_ASPNA	Uncharacterized protein. (671 aa)
	G3YG24_ASPNA	Uncharacterized protein. (677 aa)

Your Current Organism:

Aspergillus niger

NCBI taxonomy Id: 380704
Other names: A. niger ATCC 1015, Aspergillus niger ATCC 1015

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G3XLH4_ASPNA	G3XNA1_ASPNA	G3XLH4	G3XNA1	SKIP_SNW domain-containing protein.	Pre-mRNA-splicing factor; Involved in mRNA splicing where it associates with cdc5 and the other cwf proteins as part of the spliceosome.	0.992
G3XLH4_ASPNA	G3XNU7_ASPNA	G3XLH4	G3XNU7	SKIP_SNW domain-containing protein.	RRM domain-containing protein.	0.997
G3XLH4_ASPNA	G3XSC0_ASPNA	G3XLH4	G3XSC0	SKIP_SNW domain-containing protein.	MI domain-containing protein.	0.980
G3XLH4_ASPNA	G3XXL5_ASPNA	G3XLH4	G3XXL5	SKIP_SNW domain-containing protein.	Cwf21 domain-containing protein.	0.962
G3XLH4_ASPNA	G3XYP1_ASPNA	G3XLH4	G3XYP1	SKIP_SNW domain-containing protein.	Uncharacterized protein.	0.993
G3XLH4_ASPNA	G3XZJ5_ASPNA	G3XLH4	G3XZJ5	SKIP_SNW domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.984
G3XLH4_ASPNA	G3Y1A0_ASPNA	G3XLH4	G3Y1A0	SKIP_SNW domain-containing protein.	Uncharacterized protein.	0.966
G3XLH4_ASPNA	G3Y1Q2_ASPNA	G3XLH4	G3Y1Q2	SKIP_SNW domain-containing protein.	RRM domain-containing protein.	0.990
G3XLH4_ASPNA	G3Y4H8_ASPNA	G3XLH4	G3Y4H8	SKIP_SNW domain-containing protein.	Uncharacterized protein.	0.970
G3XLH4_ASPNA	G3Y4U0_ASPNA	G3XLH4	G3Y4U0	SKIP_SNW domain-containing protein.	Uncharacterized protein.	0.997
G3XLH4_ASPNA	G3Y636_ASPNA	G3XLH4	G3Y636	SKIP_SNW domain-containing protein.	Cir_N domain-containing protein.	0.954
G3XLH4_ASPNA	G3Y9R6_ASPNA	G3XLH4	G3Y9R6	SKIP_SNW domain-containing protein.	Uncharacterized protein.	0.977
G3XLH4_ASPNA	G3YBG7_ASPNA	G3XLH4	G3YBG7	SKIP_SNW domain-containing protein.	Slu7 domain-containing protein.	0.954
G3XLH4_ASPNA	G3YDQ1_ASPNA	G3XLH4	G3YDQ1	SKIP_SNW domain-containing protein.	TPR_REGION domain-containing protein.	0.998
G3XLH4_ASPNA	G3YFH2_ASPNA	G3XLH4	G3YFH2	SKIP_SNW domain-containing protein.	Uncharacterized protein.	0.907
G3XLH4_ASPNA	G3YG24_ASPNA	G3XLH4	G3YG24	SKIP_SNW domain-containing protein.	Uncharacterized protein.	0.998
G3XNA1_ASPNA	G3XLH4_ASPNA	G3XNA1	G3XLH4	Pre-mRNA-splicing factor; Involved in mRNA splicing where it associates with cdc5 and the other cwf proteins as part of the spliceosome.	SKIP_SNW domain-containing protein.	0.992
G3XNA1_ASPNA	G3XNU7_ASPNA	G3XNA1	G3XNU7	Pre-mRNA-splicing factor; Involved in mRNA splicing where it associates with cdc5 and the other cwf proteins as part of the spliceosome.	RRM domain-containing protein.	0.992
G3XNA1_ASPNA	G3XSC0_ASPNA	G3XNA1	G3XSC0	Pre-mRNA-splicing factor; Involved in mRNA splicing where it associates with cdc5 and the other cwf proteins as part of the spliceosome.	MI domain-containing protein.	0.883
G3XNA1_ASPNA	G3XXL5_ASPNA	G3XNA1	G3XXL5	Pre-mRNA-splicing factor; Involved in mRNA splicing where it associates with cdc5 and the other cwf proteins as part of the spliceosome.	Cwf21 domain-containing protein.	0.773