25 items (Aspergillus niger) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	G3YEE1_ASPNA	Uncharacterized protein. (370 aa)
	G3XLX1_ASPNA	Uncharacterized protein. (57 aa)
	G3XN13_ASPNA	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family. (96 aa)
	G3XP05_ASPNA	3-hydroxyisobutyryl-CoA hydrolase, mitochondrial; Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite; Belongs to the enoyl-CoA hydratase/isomerase family. (499 aa)
	G3XPU9_ASPNA	Uncharacterized protein. (505 aa)
	G3XRK3_ASPNA	Ribosomal_S7 domain-containing protein. (351 aa)
	G3XRL7_ASPNA	37S ribosomal protein mrp10, mitochondrial; Involved in mitochondrial genome encoded proteins translation. (101 aa)
	G3XSC9_ASPNA	AB hydrolase-1 domain-containing protein. (396 aa)
	G3XTD9_ASPNA	MRP-S28 domain-containing protein. (161 aa)
	G3XXI0_ASPNA	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (317 aa)
	G3XZ22_ASPNA	Uncharacterized protein. (113 aa)
	G3XZI9_ASPNA	Uncharacterized protein. (170 aa)
	G3XZK3_ASPNA	Sod_Fe_C domain-containing protein. (296 aa)
	G3XZM4_ASPNA	S4 RNA-binding domain-containing protein. (465 aa)
	G3Y0V3_ASPNA	Uncharacterized protein; Belongs to the universal ribosomal protein uS15 family. (299 aa)
	G3Y307_ASPNA	Uncharacterized protein. (192 aa)
	G3Y687_ASPNA	Uncharacterized protein. (220 aa)
	G3Y7D9_ASPNA	Uncharacterized protein. (89 aa)
	G3Y7E1_ASPNA	Uncharacterized protein. (387 aa)
	G3Y8M4_ASPNA	Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family. (132 aa)
	G3YA71_ASPNA	37S ribosomal protein S25, mitochondrial. (262 aa)
	G3YDW3_ASPNA	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. (444 aa)
	G3YE66_ASPNA	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family. (95 aa)
	G3YFZ5_ASPNA	Uncharacterized protein. (235 aa)
	G3YH46_ASPNA	Uncharacterized protein. (121 aa)

Your Current Organism:

Aspergillus niger

NCBI taxonomy Id: 380704
Other names: A. niger ATCC 1015, Aspergillus niger ATCC 1015

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G3XLX1_ASPNA	G3XN13_ASPNA	G3XLX1	G3XN13	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	0.956
G3XLX1_ASPNA	G3XP05_ASPNA	G3XLX1	G3XP05	Uncharacterized protein.	3-hydroxyisobutyryl-CoA hydrolase, mitochondrial; Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite; Belongs to the enoyl-CoA hydratase/isomerase family.	0.942
G3XLX1_ASPNA	G3XPU9_ASPNA	G3XLX1	G3XPU9	Uncharacterized protein.	Uncharacterized protein.	0.952
G3XLX1_ASPNA	G3XRK3_ASPNA	G3XLX1	G3XRK3	Uncharacterized protein.	Ribosomal_S7 domain-containing protein.	0.956
G3XLX1_ASPNA	G3XRL7_ASPNA	G3XLX1	G3XRL7	Uncharacterized protein.	37S ribosomal protein mrp10, mitochondrial; Involved in mitochondrial genome encoded proteins translation.	0.937
G3XLX1_ASPNA	G3XTD9_ASPNA	G3XLX1	G3XTD9	Uncharacterized protein.	MRP-S28 domain-containing protein.	0.963
G3XLX1_ASPNA	G3XXI0_ASPNA	G3XLX1	G3XXI0	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.949
G3XLX1_ASPNA	G3XZ22_ASPNA	G3XLX1	G3XZ22	Uncharacterized protein.	Uncharacterized protein.	0.967
G3XLX1_ASPNA	G3XZI9_ASPNA	G3XLX1	G3XZI9	Uncharacterized protein.	Uncharacterized protein.	0.946
G3XLX1_ASPNA	G3XZK3_ASPNA	G3XLX1	G3XZK3	Uncharacterized protein.	Sod_Fe_C domain-containing protein.	0.942
G3XLX1_ASPNA	G3XZM4_ASPNA	G3XLX1	G3XZM4	Uncharacterized protein.	S4 RNA-binding domain-containing protein.	0.922
G3XLX1_ASPNA	G3Y0V3_ASPNA	G3XLX1	G3Y0V3	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS15 family.	0.959
G3XLX1_ASPNA	G3Y307_ASPNA	G3XLX1	G3Y307	Uncharacterized protein.	Uncharacterized protein.	0.983
G3XLX1_ASPNA	G3Y687_ASPNA	G3XLX1	G3Y687	Uncharacterized protein.	Uncharacterized protein.	0.956
G3XLX1_ASPNA	G3Y7D9_ASPNA	G3XLX1	G3Y7D9	Uncharacterized protein.	Uncharacterized protein.	0.970
G3XLX1_ASPNA	G3Y7E1_ASPNA	G3XLX1	G3Y7E1	Uncharacterized protein.	Uncharacterized protein.	0.925
G3XLX1_ASPNA	G3Y8M4_ASPNA	G3XLX1	G3Y8M4	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family.	0.942
G3XLX1_ASPNA	G3YA71_ASPNA	G3XLX1	G3YA71	Uncharacterized protein.	37S ribosomal protein S25, mitochondrial.	0.949
G3XLX1_ASPNA	G3YDW3_ASPNA	G3XLX1	G3YDW3	Uncharacterized protein.	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	0.967
G3XLX1_ASPNA	G3YE66_ASPNA	G3XLX1	G3YE66	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.	0.969