(3 nodes) Transcription factor TFIIK complex network (Aspergillus niger)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	G3XPM9_ASPNA	Serine/threonine protein kinase, subunit of TFIIH, KIN28; Belongs to the protein kinase superfamily. (406 aa)
	G3Y4C9_ASPNA	CYCLIN domain-containing protein; Belongs to the cyclin family. (425 aa)
	G3Y917_ASPNA	Uncharacterized protein. (352 aa)

Your Current Organism:

Aspergillus niger

NCBI taxonomy Id: 380704
Other names: A. niger ATCC 1015, Aspergillus niger ATCC 1015

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G3XPM9_ASPNA	G3Y4C9_ASPNA	G3XPM9	G3Y4C9	Serine/threonine protein kinase, subunit of TFIIH, KIN28; Belongs to the protein kinase superfamily.	CYCLIN domain-containing protein; Belongs to the cyclin family.	0.997
G3XPM9_ASPNA	G3Y917_ASPNA	G3XPM9	G3Y917	Serine/threonine protein kinase, subunit of TFIIH, KIN28; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.998
G3Y4C9_ASPNA	G3XPM9_ASPNA	G3Y4C9	G3XPM9	CYCLIN domain-containing protein; Belongs to the cyclin family.	Serine/threonine protein kinase, subunit of TFIIH, KIN28; Belongs to the protein kinase superfamily.	0.997
G3Y4C9_ASPNA	G3Y917_ASPNA	G3Y4C9	G3Y917	CYCLIN domain-containing protein; Belongs to the cyclin family.	Uncharacterized protein.	0.998
G3Y917_ASPNA	G3XPM9_ASPNA	G3Y917	G3XPM9	Uncharacterized protein.	Serine/threonine protein kinase, subunit of TFIIH, KIN28; Belongs to the protein kinase superfamily.	0.998
G3Y917_ASPNA	G3Y4C9_ASPNA	G3Y917	G3Y4C9	Uncharacterized protein.	CYCLIN domain-containing protein; Belongs to the cyclin family.	0.998