(36 nodes) Catalytic step 2 spliceosome network (Aspergillus niger)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	G3Y356_ASPNA	Uncharacterized protein. (939 aa)
	G3YGG8_ASPNA	WD_REPEATS_REGION domain-containing protein. (453 aa)
	G3YG24_ASPNA	Uncharacterized protein. (677 aa)
	G3YEC9_ASPNA	Uncharacterized protein. (215 aa)
	G3YDQ1_ASPNA	TPR_REGION domain-containing protein. (850 aa)
	G3YBU5_ASPNA	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (211 aa)
	G3YBP5_ASPNA	Uncharacterized protein. (537 aa)
	G3YAF0_ASPNA	Pinin_SDK_memA domain-containing protein. (307 aa)
	G3Y9R6_ASPNA	Uncharacterized protein. (308 aa)
	G3Y8N4_ASPNA	Sm domain-containing protein. (310 aa)
	G3Y6Z6_ASPNA	Tr-type G domain-containing protein. (989 aa)
	G3Y6J7_ASPNA	Uncharacterized protein. (359 aa)
	G3Y598_ASPNA	PPIase cyclophilin-type domain-containing protein. (577 aa)
	G3Y4S1_ASPNA	Uncharacterized protein. (477 aa)
	G3Y4H8_ASPNA	Uncharacterized protein. (408 aa)
	G3Y345_ASPNA	SF3b1 domain-containing protein. (1229 aa)
	G3Y2Y5_ASPNA	RRM domain-containing protein. (112 aa)
	G3Y1Q2_ASPNA	RRM domain-containing protein. (152 aa)
	G3Y1A0_ASPNA	Uncharacterized protein. (288 aa)
	G3XZJ5_ASPNA	WD_REPEATS_REGION domain-containing protein. (579 aa)
	G3XZ78_ASPNA	Uncharacterized protein. (538 aa)
	G3XZ75_ASPNA	JAB_MPN domain-containing protein. (2353 aa)
	G3XYG4_ASPNA	Sm domain-containing protein. (80 aa)
	G3XVH9_ASPNA	Uncharacterized protein. (227 aa)
	G3XV02_ASPNA	WD_REPEATS_REGION domain-containing protein. (359 aa)
	G3XUX1_ASPNA	Uncharacterized protein. (262 aa)
	G3XSX5_ASPNA	Matrin-type domain-containing protein. (238 aa)
	G3XSR8_ASPNA	Uncharacterized protein. (629 aa)
	G3XSC0_ASPNA	MI domain-containing protein. (880 aa)
	G3XRN4_ASPNA	Uncharacterized protein. (284 aa)
	G3XR89_ASPNA	Sm domain-containing protein. (136 aa)
	G3XP18_ASPNA	Small nuclear ribonucleoprotein Sm D2. (115 aa)
	G3XNU7_ASPNA	RRM domain-containing protein. (350 aa)
	G3XNA1_ASPNA	Pre-mRNA-splicing factor; Involved in mRNA splicing where it associates with cdc5 and the other cwf proteins as part of the spliceosome. (1418 aa)
	G3XLX2_ASPNA	Uncharacterized protein. (114 aa)
	G3XLH6_ASPNA	WD_REPEATS_REGION domain-containing protein. (332 aa)

Your Current Organism:

Aspergillus niger

NCBI taxonomy Id: 380704
Other names: A. niger ATCC 1015, Aspergillus niger ATCC 1015

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G3XLH6_ASPNA	G3XNA1_ASPNA	G3XLH6	G3XNA1	WD_REPEATS_REGION domain-containing protein.	Pre-mRNA-splicing factor; Involved in mRNA splicing where it associates with cdc5 and the other cwf proteins as part of the spliceosome.	0.600
G3XLH6_ASPNA	G3XZ75_ASPNA	G3XLH6	G3XZ75	WD_REPEATS_REGION domain-containing protein.	JAB_MPN domain-containing protein.	0.944
G3XLH6_ASPNA	G3XZJ5_ASPNA	G3XLH6	G3XZJ5	WD_REPEATS_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.694
G3XLH6_ASPNA	G3Y1Q2_ASPNA	G3XLH6	G3Y1Q2	WD_REPEATS_REGION domain-containing protein.	RRM domain-containing protein.	0.468
G3XLH6_ASPNA	G3Y9R6_ASPNA	G3XLH6	G3Y9R6	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.572
G3XLH6_ASPNA	G3YDQ1_ASPNA	G3XLH6	G3YDQ1	WD_REPEATS_REGION domain-containing protein.	TPR_REGION domain-containing protein.	0.461
G3XLH6_ASPNA	G3YG24_ASPNA	G3XLH6	G3YG24	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.472
G3XLX2_ASPNA	G3XNA1_ASPNA	G3XLX2	G3XNA1	Uncharacterized protein.	Pre-mRNA-splicing factor; Involved in mRNA splicing where it associates with cdc5 and the other cwf proteins as part of the spliceosome.	0.613
G3XLX2_ASPNA	G3XNU7_ASPNA	G3XLX2	G3XNU7	Uncharacterized protein.	RRM domain-containing protein.	0.927
G3XLX2_ASPNA	G3XP18_ASPNA	G3XLX2	G3XP18	Uncharacterized protein.	Small nuclear ribonucleoprotein Sm D2.	0.990
G3XLX2_ASPNA	G3XR89_ASPNA	G3XLX2	G3XR89	Uncharacterized protein.	Sm domain-containing protein.	0.925
G3XLX2_ASPNA	G3XSC0_ASPNA	G3XLX2	G3XSC0	Uncharacterized protein.	MI domain-containing protein.	0.964
G3XLX2_ASPNA	G3XSX5_ASPNA	G3XLX2	G3XSX5	Uncharacterized protein.	Matrin-type domain-containing protein.	0.994
G3XLX2_ASPNA	G3XUX1_ASPNA	G3XLX2	G3XUX1	Uncharacterized protein.	Uncharacterized protein.	0.917
G3XLX2_ASPNA	G3XV02_ASPNA	G3XLX2	G3XV02	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.621
G3XLX2_ASPNA	G3XVH9_ASPNA	G3XLX2	G3XVH9	Uncharacterized protein.	Uncharacterized protein.	0.939
G3XLX2_ASPNA	G3XYG4_ASPNA	G3XLX2	G3XYG4	Uncharacterized protein.	Sm domain-containing protein.	0.975
G3XLX2_ASPNA	G3XZ75_ASPNA	G3XLX2	G3XZ75	Uncharacterized protein.	JAB_MPN domain-containing protein.	0.975
G3XLX2_ASPNA	G3XZJ5_ASPNA	G3XLX2	G3XZJ5	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.943
G3XLX2_ASPNA	G3Y1A0_ASPNA	G3XLX2	G3Y1A0	Uncharacterized protein.	Uncharacterized protein.	0.513