(6 nodes) Cdc73/Paf1 complex network (Aspergillus niger)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	G3YF93_ASPNA	WD_REPEATS_REGION domain-containing protein. (312 aa)
	G3Y4R9_ASPNA	Uncharacterized protein. (1457 aa)
	G3Y298_ASPNA	CDC73_C domain-containing protein. (433 aa)
	G3Y277_ASPNA	Uncharacterized protein. (503 aa)
	G3XYU5_ASPNA	Plus3 domain-containing protein. (606 aa)
	G3YFG6_ASPNA	Uncharacterized protein. (461 aa)

Your Current Organism:

Aspergillus niger

NCBI taxonomy Id: 380704
Other names: A. niger ATCC 1015, Aspergillus niger ATCC 1015

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G3XYU5_ASPNA	G3Y277_ASPNA	G3XYU5	G3Y277	Plus3 domain-containing protein.	Uncharacterized protein.	0.995
G3XYU5_ASPNA	G3Y298_ASPNA	G3XYU5	G3Y298	Plus3 domain-containing protein.	CDC73_C domain-containing protein.	0.994
G3XYU5_ASPNA	G3Y4R9_ASPNA	G3XYU5	G3Y4R9	Plus3 domain-containing protein.	Uncharacterized protein.	0.995
G3XYU5_ASPNA	G3YF93_ASPNA	G3XYU5	G3YF93	Plus3 domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.956
G3XYU5_ASPNA	G3YFG6_ASPNA	G3XYU5	G3YFG6	Plus3 domain-containing protein.	Uncharacterized protein.	0.994
G3Y277_ASPNA	G3XYU5_ASPNA	G3Y277	G3XYU5	Uncharacterized protein.	Plus3 domain-containing protein.	0.995
G3Y277_ASPNA	G3Y298_ASPNA	G3Y277	G3Y298	Uncharacterized protein.	CDC73_C domain-containing protein.	0.998
G3Y277_ASPNA	G3Y4R9_ASPNA	G3Y277	G3Y4R9	Uncharacterized protein.	Uncharacterized protein.	0.998
G3Y277_ASPNA	G3YF93_ASPNA	G3Y277	G3YF93	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.993
G3Y277_ASPNA	G3YFG6_ASPNA	G3Y277	G3YFG6	Uncharacterized protein.	Uncharacterized protein.	0.999
G3Y298_ASPNA	G3XYU5_ASPNA	G3Y298	G3XYU5	CDC73_C domain-containing protein.	Plus3 domain-containing protein.	0.994
G3Y298_ASPNA	G3Y277_ASPNA	G3Y298	G3Y277	CDC73_C domain-containing protein.	Uncharacterized protein.	0.998
G3Y298_ASPNA	G3Y4R9_ASPNA	G3Y298	G3Y4R9	CDC73_C domain-containing protein.	Uncharacterized protein.	0.998
G3Y298_ASPNA	G3YF93_ASPNA	G3Y298	G3YF93	CDC73_C domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.996
G3Y298_ASPNA	G3YFG6_ASPNA	G3Y298	G3YFG6	CDC73_C domain-containing protein.	Uncharacterized protein.	0.998
G3Y4R9_ASPNA	G3XYU5_ASPNA	G3Y4R9	G3XYU5	Uncharacterized protein.	Plus3 domain-containing protein.	0.995
G3Y4R9_ASPNA	G3Y277_ASPNA	G3Y4R9	G3Y277	Uncharacterized protein.	Uncharacterized protein.	0.998
G3Y4R9_ASPNA	G3Y298_ASPNA	G3Y4R9	G3Y298	Uncharacterized protein.	CDC73_C domain-containing protein.	0.998
G3Y4R9_ASPNA	G3YF93_ASPNA	G3Y4R9	G3YF93	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.995
G3Y4R9_ASPNA	G3YFG6_ASPNA	G3Y4R9	G3YFG6	Uncharacterized protein.	Uncharacterized protein.	0.997