(29 nodes) SCF ubiquitin ligase complex network (Aspergillus niger)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	G3Y3P1_ASPNA	Uncharacterized protein. (658 aa)
	G3YBY6_ASPNA	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (147 aa)
	G3Y9A9_ASPNA	Uncharacterized protein. (862 aa)
	G3Y972_ASPNA	Uncharacterized protein. (531 aa)
	G3Y702_ASPNA	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function. (103 aa)
	G3Y3Y2_ASPNA	Uncharacterized protein. (594 aa)
	G3Y308_ASPNA	Uncharacterized protein. (670 aa)
	G3Y1L7_ASPNA	F-box domain-containing protein. (543 aa)
	G3Y0L5_ASPNA	Ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family. (221 aa)
	G3Y017_ASPNA	Uncharacterized protein. (491 aa)
	G3XZI7_ASPNA	F-box domain-containing protein. (419 aa)
	G3XZ89_ASPNA	Uncharacterized protein. (923 aa)
	G3XZ62_ASPNA	F-box domain-containing protein. (727 aa)
	G3XXS4_ASPNA	Uncharacterized protein. (210 aa)
	G3XVN0_ASPNA	Uncharacterized protein. (618 aa)
	G3XVL1_ASPNA	F-box domain-containing protein. (548 aa)
	G3XV85_ASPNA	Ubiquitin-like domain-containing protein. (78 aa)
	G3XUV8_ASPNA	Uncharacterized protein. (725 aa)
	G3XSS7_ASPNA	Sulfatase domain-containing protein. (613 aa)
	G3XSN8_ASPNA	Uncharacterized protein. (837 aa)
	G3XR21_ASPNA	Uncharacterized protein. (500 aa)
	G3XQY3_ASPNA	Uncharacterized protein. (511 aa)
	G3XPP0_ASPNA	Uncharacterized protein. (580 aa)
	G3XPJ6_ASPNA	Uncharacterized protein. (557 aa)
	G3XN99_ASPNA	F-box domain-containing protein. (476 aa)
	G3XM86_ASPNA	Uncharacterized protein. (491 aa)
	G3YHF5_ASPNA	Cullin-1; Belongs to the cullin family. (764 aa)
	G3YF08_ASPNA	Realted to arylsulfatase. (569 aa)
	G3YDF1_ASPNA	Uncharacterized protein. (477 aa)

Your Current Organism:

Aspergillus niger

NCBI taxonomy Id: 380704
Other names: A. niger ATCC 1015, Aspergillus niger ATCC 1015

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G3XM86_ASPNA	G3YHF5_ASPNA	G3XM86	G3YHF5	Uncharacterized protein.	Cullin-1; Belongs to the cullin family.	0.409
G3XPJ6_ASPNA	G3XV85_ASPNA	G3XPJ6	G3XV85	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.479
G3XPJ6_ASPNA	G3Y0L5_ASPNA	G3XPJ6	G3Y0L5	Uncharacterized protein.	Ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.	0.427
G3XPJ6_ASPNA	G3YBY6_ASPNA	G3XPJ6	G3YBY6	Uncharacterized protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.461
G3XPJ6_ASPNA	G3YHF5_ASPNA	G3XPJ6	G3YHF5	Uncharacterized protein.	Cullin-1; Belongs to the cullin family.	0.823
G3XPP0_ASPNA	G3XV85_ASPNA	G3XPP0	G3XV85	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.635
G3XPP0_ASPNA	G3YHF5_ASPNA	G3XPP0	G3YHF5	Uncharacterized protein.	Cullin-1; Belongs to the cullin family.	0.715
G3XUV8_ASPNA	G3YHF5_ASPNA	G3XUV8	G3YHF5	Uncharacterized protein.	Cullin-1; Belongs to the cullin family.	0.409
G3XV85_ASPNA	G3XPJ6_ASPNA	G3XV85	G3XPJ6	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.479
G3XV85_ASPNA	G3XPP0_ASPNA	G3XV85	G3XPP0	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.635
G3XV85_ASPNA	G3XVL1_ASPNA	G3XV85	G3XVL1	Ubiquitin-like domain-containing protein.	F-box domain-containing protein.	0.719
G3XV85_ASPNA	G3XZ62_ASPNA	G3XV85	G3XZ62	Ubiquitin-like domain-containing protein.	F-box domain-containing protein.	0.701
G3XV85_ASPNA	G3XZ89_ASPNA	G3XV85	G3XZ89	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.827
G3XV85_ASPNA	G3Y0L5_ASPNA	G3XV85	G3Y0L5	Ubiquitin-like domain-containing protein.	Ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.	0.661
G3XV85_ASPNA	G3Y308_ASPNA	G3XV85	G3Y308	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.840
G3XV85_ASPNA	G3Y3P1_ASPNA	G3XV85	G3Y3P1	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.886
G3XV85_ASPNA	G3Y702_ASPNA	G3XV85	G3Y702	Ubiquitin-like domain-containing protein.	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.	0.821
G3XV85_ASPNA	G3Y972_ASPNA	G3XV85	G3Y972	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.635
G3XV85_ASPNA	G3Y9A9_ASPNA	G3XV85	G3Y9A9	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.886
G3XV85_ASPNA	G3YBY6_ASPNA	G3XV85	G3YBY6	Ubiquitin-like domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.727