23 items (Aspergillus niger) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	G3Y3C3_ASPNA	Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family. (150 aa)
	G3Y3D9_ASPNA	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (200 aa)
	G3Y639_ASPNA	Uncharacterized protein. (169 aa)
	G3XPV5_ASPNA	Uncharacterized protein. (54 aa)
	G3XRK8_ASPNA	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (200 aa)
	G3XS17_ASPNA	Uncharacterized protein; Belongs to the universal ribosomal protein uS8 family. (130 aa)
	G3XUR9_ASPNA	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. (259 aa)
	G3XUZ2_ASPNA	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (133 aa)
	G3XZC4_ASPNA	40S ribosomal protein S21; Required for the processing of the 20S rRNA-precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Has a physiological role leading to 18S rRNA stability. (88 aa)
	G3XZG3_ASPNA	Uncharacterized protein. (314 aa)
	G3XZH2_ASPNA	Ribosomal_S17_N domain-containing protein; Belongs to the universal ribosomal protein uS17 family. (160 aa)
	RPS0	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. (298 aa)
	G3Y2Q3_ASPNA	S4 RNA-binding domain-containing protein; Belongs to the universal ribosomal protein uS4 family. (193 aa)
	G3Y3B7_ASPNA	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (143 aa)
	G3Y9W9_ASPNA	BZIP domain-containing protein. (254 aa)
	G3YBH9_ASPNA	40S ribosomal protein S27. (80 aa)
	G3YBZ5_ASPNA	Eukaryotic translation initiation factor 2A; Functions in the early steps of protein synthesis of a small number of specific mRNAs. Acts by directing the binding of methionyl- tRNAi to 40S ribosomal subunits. In contrast to the eIF-2 complex, it binds methionyl-tRNAi to 40S subunits in a codon-dependent manner, whereas the eIF-2 complex binds methionyl-tRNAi to 40S subunits in a GTP-dependent manner. (673 aa)
	G3YCF8_ASPNA	Abhydrolase_3 domain-containing protein. (422 aa)
	G3YE37_ASPNA	Uncharacterized protein. (147 aa)
	G3YE88_ASPNA	Uncharacterized protein. (532 aa)
	G3YFV5_ASPNA	S10_plectin domain-containing protein. (150 aa)
	G3Y659_ASPNA	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family. (153 aa)
	G3Y9G2_ASPNA	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (237 aa)

Your Current Organism:

Aspergillus niger

NCBI taxonomy Id: 380704
Other names: A. niger ATCC 1015, Aspergillus niger ATCC 1015

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G3XPV5_ASPNA	G3XRK8_ASPNA	G3XPV5	G3XRK8	Uncharacterized protein.	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.	0.998
G3XPV5_ASPNA	G3XS17_ASPNA	G3XPV5	G3XS17	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS8 family.	0.998
G3XPV5_ASPNA	G3XUR9_ASPNA	G3XPV5	G3XUR9	Uncharacterized protein.	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	0.998
G3XPV5_ASPNA	G3XUZ2_ASPNA	G3XPV5	G3XUZ2	Uncharacterized protein.	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.	0.998
G3XPV5_ASPNA	G3XZC4_ASPNA	G3XPV5	G3XZC4	Uncharacterized protein.	40S ribosomal protein S21; Required for the processing of the 20S rRNA-precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Has a physiological role leading to 18S rRNA stability.	0.928
G3XPV5_ASPNA	G3XZG3_ASPNA	G3XPV5	G3XZG3	Uncharacterized protein.	Uncharacterized protein.	0.990
G3XPV5_ASPNA	G3XZH2_ASPNA	G3XPV5	G3XZH2	Uncharacterized protein.	Ribosomal_S17_N domain-containing protein; Belongs to the universal ribosomal protein uS17 family.	0.990
G3XPV5_ASPNA	G3Y2Q3_ASPNA	G3XPV5	G3Y2Q3	Uncharacterized protein.	S4 RNA-binding domain-containing protein; Belongs to the universal ribosomal protein uS4 family.	0.998
G3XPV5_ASPNA	G3Y3B7_ASPNA	G3XPV5	G3Y3B7	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.998
G3XPV5_ASPNA	G3Y3C3_ASPNA	G3XPV5	G3Y3C3	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family.	0.998
G3XPV5_ASPNA	G3Y3D9_ASPNA	G3XPV5	G3Y3D9	Uncharacterized protein.	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.	0.998
G3XPV5_ASPNA	G3Y639_ASPNA	G3XPV5	G3Y639	Uncharacterized protein.	Uncharacterized protein.	0.998
G3XPV5_ASPNA	G3Y659_ASPNA	G3XPV5	G3Y659	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.	0.998
G3XPV5_ASPNA	G3Y9G2_ASPNA	G3XPV5	G3Y9G2	Uncharacterized protein.	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.	0.998
G3XPV5_ASPNA	G3Y9W9_ASPNA	G3XPV5	G3Y9W9	Uncharacterized protein.	BZIP domain-containing protein.	0.996
G3XPV5_ASPNA	G3YBH9_ASPNA	G3XPV5	G3YBH9	Uncharacterized protein.	40S ribosomal protein S27.	0.998
G3XPV5_ASPNA	G3YCF8_ASPNA	G3XPV5	G3YCF8	Uncharacterized protein.	Abhydrolase_3 domain-containing protein.	0.986
G3XPV5_ASPNA	G3YE37_ASPNA	G3XPV5	G3YE37	Uncharacterized protein.	Uncharacterized protein.	0.998
G3XPV5_ASPNA	G3YE88_ASPNA	G3XPV5	G3YE88	Uncharacterized protein.	Uncharacterized protein.	0.998
G3XPV5_ASPNA	G3YFV5_ASPNA	G3XPV5	G3YFV5	Uncharacterized protein.	S10_plectin domain-containing protein.	0.998