(32 nodes) DNA packaging complex network (Aspergillus niger)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	G3XRZ0_ASPNA	Uncharacterized protein. (452 aa)
	G3XLI9_ASPNA	ULP_PROTEASE domain-containing protein. (1212 aa)
	G3XNL9_ASPNA	Zn(2)-C6 fungal-type domain-containing protein. (822 aa)
	G3XPP4_ASPNA	Uncharacterized protein. (883 aa)
	G3XQW3_ASPNA	Zn(2)-C6 fungal-type domain-containing protein. (823 aa)
	G3XUJ6_ASPNA	Uncharacterized protein. (244 aa)
	G3XUJ7_ASPNA	Uncharacterized protein. (162 aa)
	G3XV60_ASPNA	Uncharacterized protein. (268 aa)
	G3XVD0_ASPNA	Uncharacterized protein. (809 aa)
	h3lp	Histone 3-like protein. (183 aa)
	G3XZ29_ASPNA	SMC protein. (1437 aa)
	G3XZP8_ASPNA	Uncharacterized protein. (450 aa)
	G3Y1B8_ASPNA	DUF2236 domain-containing protein. (458 aa)
	G3Y1D8_ASPNA	Cnd3 domain-containing protein. (1115 aa)
	G3Y1R6_ASPNA	Stn1 domain-containing protein. (232 aa)
	G3Y1S3_ASPNA	J domain-containing protein. (322 aa)
	G3Y288_ASPNA	Structural maintenance of chromosomes protein. (1179 aa)
	G3Y2C4_ASPNA	Fungal_trans domain-containing protein. (555 aa)
	h4	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
	G3Y445_ASPNA	DNA helicase. (721 aa)
	G3Y4J1_ASPNA	Uncharacterized protein. (917 aa)
	h2AV	Histone H2A; Belongs to the histone H2A family. (138 aa)
	G3Y7G4_ASPNA	DUF2236 domain-containing protein. (373 aa)
	G3YA89_ASPNA	DUF4140 domain-containing protein. (497 aa)
	G3YC49_ASPNA	Uncharacterized protein. (662 aa)
	h2A	Histone H2A; Belongs to the histone H2A family. (134 aa)
	G3YC94_ASPNA	Histone H2B; Belongs to the histone H2B family. (141 aa)
	G3YDT7_ASPNA	Uncharacterized protein. (378 aa)
	G3YEC3_ASPNA	Uncharacterized protein. (574 aa)
	h4-2	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
	h3	Histone H3; Belongs to the histone H3 family. (136 aa)
	G3YGB3_ASPNA	Uncharacterized protein. (714 aa)

Your Current Organism:

Aspergillus niger

NCBI taxonomy Id: 380704
Other names: A. niger ATCC 1015, Aspergillus niger ATCC 1015

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G3XNL9_ASPNA	G3YC94_ASPNA	G3XNL9	G3YC94	Zn(2)-C6 fungal-type domain-containing protein.	Histone H2B; Belongs to the histone H2B family.	0.409
G3XNL9_ASPNA	G3YEC3_ASPNA	G3XNL9	G3YEC3	Zn(2)-C6 fungal-type domain-containing protein.	Uncharacterized protein.	0.524
G3XNL9_ASPNA	G3YGB3_ASPNA	G3XNL9	G3YGB3	Zn(2)-C6 fungal-type domain-containing protein.	Uncharacterized protein.	0.524
G3XNL9_ASPNA	h2A	G3XNL9	G3YC93	Zn(2)-C6 fungal-type domain-containing protein.	Histone H2A; Belongs to the histone H2A family.	0.546
G3XNL9_ASPNA	h3	G3XNL9	G3YEP5	Zn(2)-C6 fungal-type domain-containing protein.	Histone H3; Belongs to the histone H3 family.	0.419
G3XNL9_ASPNA	h3lp	G3XNL9	G3XXG9	Zn(2)-C6 fungal-type domain-containing protein.	Histone 3-like protein.	0.419
G3XNL9_ASPNA	h4-2	G3XNL9	G3YEP4	Zn(2)-C6 fungal-type domain-containing protein.	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	0.588
G3XPP4_ASPNA	G3XZ29_ASPNA	G3XPP4	G3XZ29	Uncharacterized protein.	SMC protein.	0.998
G3XPP4_ASPNA	G3Y1D8_ASPNA	G3XPP4	G3Y1D8	Uncharacterized protein.	Cnd3 domain-containing protein.	0.999
G3XPP4_ASPNA	G3Y288_ASPNA	G3XPP4	G3Y288	Uncharacterized protein.	Structural maintenance of chromosomes protein.	0.997
G3XQW3_ASPNA	G3YC94_ASPNA	G3XQW3	G3YC94	Zn(2)-C6 fungal-type domain-containing protein.	Histone H2B; Belongs to the histone H2B family.	0.409
G3XQW3_ASPNA	G3YEC3_ASPNA	G3XQW3	G3YEC3	Zn(2)-C6 fungal-type domain-containing protein.	Uncharacterized protein.	0.524
G3XQW3_ASPNA	G3YGB3_ASPNA	G3XQW3	G3YGB3	Zn(2)-C6 fungal-type domain-containing protein.	Uncharacterized protein.	0.524
G3XQW3_ASPNA	h2A	G3XQW3	G3YC93	Zn(2)-C6 fungal-type domain-containing protein.	Histone H2A; Belongs to the histone H2A family.	0.546
G3XQW3_ASPNA	h3	G3XQW3	G3YEP5	Zn(2)-C6 fungal-type domain-containing protein.	Histone H3; Belongs to the histone H3 family.	0.419
G3XQW3_ASPNA	h3lp	G3XQW3	G3XXG9	Zn(2)-C6 fungal-type domain-containing protein.	Histone 3-like protein.	0.419
G3XQW3_ASPNA	h4-2	G3XQW3	G3YEP4	Zn(2)-C6 fungal-type domain-containing protein.	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	0.588
G3XRZ0_ASPNA	G3XVD0_ASPNA	G3XRZ0	G3XVD0	Uncharacterized protein.	Uncharacterized protein.	0.456
G3XRZ0_ASPNA	G3XZ29_ASPNA	G3XRZ0	G3XZ29	Uncharacterized protein.	SMC protein.	0.536
G3XRZ0_ASPNA	G3XZP8_ASPNA	G3XRZ0	G3XZP8	Uncharacterized protein.	Uncharacterized protein.	0.510