(6 nodes) Snf7 family network (Aspergillus niger)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	G3XNI8_ASPNA	Uncharacterized protein. (228 aa)
	G3XNF7_ASPNA	Uncharacterized protein. (227 aa)
	G3YAC7_ASPNA	Uncharacterized protein. (455 aa)
	G3YFH0_ASPNA	Uncharacterized protein. (207 aa)
	G3YEC4_ASPNA	Uncharacterized protein. (243 aa)
	G3Y9E5_ASPNA	Uncharacterized protein. (216 aa)

Your Current Organism:

Aspergillus niger

NCBI taxonomy Id: 380704
Other names: A. niger ATCC 1015, Aspergillus niger ATCC 1015

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G3XNF7_ASPNA	G3XNI8_ASPNA	G3XNF7	G3XNI8	Uncharacterized protein.	Uncharacterized protein.	0.997
G3XNF7_ASPNA	G3Y9E5_ASPNA	G3XNF7	G3Y9E5	Uncharacterized protein.	Uncharacterized protein.	0.979
G3XNF7_ASPNA	G3YAC7_ASPNA	G3XNF7	G3YAC7	Uncharacterized protein.	Uncharacterized protein.	0.892
G3XNF7_ASPNA	G3YEC4_ASPNA	G3XNF7	G3YEC4	Uncharacterized protein.	Uncharacterized protein.	0.995
G3XNF7_ASPNA	G3YFH0_ASPNA	G3XNF7	G3YFH0	Uncharacterized protein.	Uncharacterized protein.	0.984
G3XNI8_ASPNA	G3XNF7_ASPNA	G3XNI8	G3XNF7	Uncharacterized protein.	Uncharacterized protein.	0.997
G3XNI8_ASPNA	G3Y9E5_ASPNA	G3XNI8	G3Y9E5	Uncharacterized protein.	Uncharacterized protein.	0.963
G3XNI8_ASPNA	G3YAC7_ASPNA	G3XNI8	G3YAC7	Uncharacterized protein.	Uncharacterized protein.	0.956
G3XNI8_ASPNA	G3YEC4_ASPNA	G3XNI8	G3YEC4	Uncharacterized protein.	Uncharacterized protein.	0.996
G3XNI8_ASPNA	G3YFH0_ASPNA	G3XNI8	G3YFH0	Uncharacterized protein.	Uncharacterized protein.	0.984
G3Y9E5_ASPNA	G3XNF7_ASPNA	G3Y9E5	G3XNF7	Uncharacterized protein.	Uncharacterized protein.	0.979
G3Y9E5_ASPNA	G3XNI8_ASPNA	G3Y9E5	G3XNI8	Uncharacterized protein.	Uncharacterized protein.	0.963
G3Y9E5_ASPNA	G3YAC7_ASPNA	G3Y9E5	G3YAC7	Uncharacterized protein.	Uncharacterized protein.	0.852
G3Y9E5_ASPNA	G3YEC4_ASPNA	G3Y9E5	G3YEC4	Uncharacterized protein.	Uncharacterized protein.	0.988
G3Y9E5_ASPNA	G3YFH0_ASPNA	G3Y9E5	G3YFH0	Uncharacterized protein.	Uncharacterized protein.	0.896
G3YAC7_ASPNA	G3XNF7_ASPNA	G3YAC7	G3XNF7	Uncharacterized protein.	Uncharacterized protein.	0.892
G3YAC7_ASPNA	G3XNI8_ASPNA	G3YAC7	G3XNI8	Uncharacterized protein.	Uncharacterized protein.	0.956
G3YAC7_ASPNA	G3Y9E5_ASPNA	G3YAC7	G3Y9E5	Uncharacterized protein.	Uncharacterized protein.	0.852
G3YAC7_ASPNA	G3YEC4_ASPNA	G3YAC7	G3YEC4	Uncharacterized protein.	Uncharacterized protein.	0.971
G3YAC7_ASPNA	G3YFH0_ASPNA	G3YAC7	G3YFH0	Uncharacterized protein.	Uncharacterized protein.	0.943