(26 nodes) Chromosome Maintenance network (Aspergillus niger)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	G3XZR3_ASPNA	EthD domain-containing protein. (153 aa)
	G3Y4J0_ASPNA	Uncharacterized protein. (1643 aa)
	G3YBM8_ASPNA	Uncharacterized protein. (427 aa)
	G3YA68_ASPNA	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (541 aa)
	G3Y9H7_ASPNA	Uncharacterized protein. (361 aa)
	G3Y9H0_ASPNA	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes. (458 aa)
	G3YHL8_ASPNA	Ribosomal_L7Ae domain-containing protein. (128 aa)
	G3YE60_ASPNA	Uncharacterized protein. (417 aa)
	G3YCV4_ASPNA	RecQ family helicase MusN. (1452 aa)
	G3YC94_ASPNA	Histone H2B; Belongs to the histone H2B family. (141 aa)
	G3YBN8_ASPNA	Uncharacterized protein. (197 aa)
	G3Y4T2_ASPNA	rRNA pseudouridine synthase. (493 aa)
	G3XPT6_ASPNA	3'-5' exonuclease domain-containing protein. (309 aa)
	G3XLP9_ASPNA	snoRNP protein NOP10. (69 aa)
	G3XLL3_ASPNA	Uncharacterized protein. (235 aa)
	G3XZU8_ASPNA	Uncharacterized protein. (547 aa)
	G3Y0C8_ASPNA	AAA domain-containing protein. (926 aa)
	G3Y1N5_ASPNA	Uncharacterized protein. (574 aa)
	G3Y383_ASPNA	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. (592 aa)
	G3XR35_ASPNA	TruB_N domain-containing protein. (402 aa)
	G3XS56_ASPNA	Uncharacterized protein. (555 aa)
	G3XSL2_ASPNA	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes. (469 aa)
	G3XTE4_ASPNA	Uncharacterized protein. (1112 aa)
	G3XTW0_ASPNA	Uncharacterized protein. (95 aa)
	G3XWW5_ASPNA	Uncharacterized protein. (396 aa)
	G3XWY6_ASPNA	Telo_bind domain-containing protein. (607 aa)

Your Current Organism:

Aspergillus niger

NCBI taxonomy Id: 380704
Other names: A. niger ATCC 1015, Aspergillus niger ATCC 1015

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G3XLL3_ASPNA	G3XPT6_ASPNA	G3XLL3	G3XPT6	Uncharacterized protein.	3'-5' exonuclease domain-containing protein.	0.704
G3XLL3_ASPNA	G3XR35_ASPNA	G3XLL3	G3XR35	Uncharacterized protein.	TruB_N domain-containing protein.	0.502
G3XLL3_ASPNA	G3XS56_ASPNA	G3XLL3	G3XS56	Uncharacterized protein.	Uncharacterized protein.	0.475
G3XLL3_ASPNA	G3XZR3_ASPNA	G3XLL3	G3XZR3	Uncharacterized protein.	EthD domain-containing protein.	0.475
G3XLL3_ASPNA	G3Y383_ASPNA	G3XLL3	G3Y383	Uncharacterized protein.	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.	0.671
G3XLL3_ASPNA	G3Y4T2_ASPNA	G3XLL3	G3Y4T2	Uncharacterized protein.	rRNA pseudouridine synthase.	0.502
G3XLL3_ASPNA	G3YA68_ASPNA	G3XLL3	G3YA68	Uncharacterized protein.	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.	0.475
G3XLL3_ASPNA	G3YCV4_ASPNA	G3XLL3	G3YCV4	Uncharacterized protein.	RecQ family helicase MusN.	0.475
G3XLL3_ASPNA	G3YHL8_ASPNA	G3XLL3	G3YHL8	Uncharacterized protein.	Ribosomal_L7Ae domain-containing protein.	0.410
G3XLP9_ASPNA	G3XR35_ASPNA	G3XLP9	G3XR35	snoRNP protein NOP10.	TruB_N domain-containing protein.	0.979
G3XLP9_ASPNA	G3XSL2_ASPNA	G3XLP9	G3XSL2	snoRNP protein NOP10.	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.	0.551
G3XLP9_ASPNA	G3XWY6_ASPNA	G3XLP9	G3XWY6	snoRNP protein NOP10.	Telo_bind domain-containing protein.	0.793
G3XLP9_ASPNA	G3Y4T2_ASPNA	G3XLP9	G3Y4T2	snoRNP protein NOP10.	rRNA pseudouridine synthase.	0.996
G3XLP9_ASPNA	G3Y9H0_ASPNA	G3XLP9	G3Y9H0	snoRNP protein NOP10.	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.	0.550
G3XLP9_ASPNA	G3YBM8_ASPNA	G3XLP9	G3YBM8	snoRNP protein NOP10.	Uncharacterized protein.	0.938
G3XLP9_ASPNA	G3YE60_ASPNA	G3XLP9	G3YE60	snoRNP protein NOP10.	Uncharacterized protein.	0.583
G3XLP9_ASPNA	G3YHL8_ASPNA	G3XLP9	G3YHL8	snoRNP protein NOP10.	Ribosomal_L7Ae domain-containing protein.	0.999
G3XPT6_ASPNA	G3XLL3_ASPNA	G3XPT6	G3XLL3	3'-5' exonuclease domain-containing protein.	Uncharacterized protein.	0.704
G3XPT6_ASPNA	G3XS56_ASPNA	G3XPT6	G3XS56	3'-5' exonuclease domain-containing protein.	Uncharacterized protein.	0.598
G3XPT6_ASPNA	G3XTE4_ASPNA	G3XPT6	G3XTE4	3'-5' exonuclease domain-containing protein.	Uncharacterized protein.	0.539