STRINGSTRING
OBQ68039.1 OBQ68039.1 OBQ68040.1 OBQ68040.1 OBQ68041.1 OBQ68041.1 OBQ68042.1 OBQ68042.1 OBQ68092.1 OBQ68092.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
OBQ68039.1Nodulation protein NodZ; Derived by automated computational analysis using gene prediction method: Protein Homology. (329 aa)
OBQ68040.1GDP-mannose 4,6-dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. (366 aa)
OBQ68041.1GDP-fucose synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (322 aa)
OBQ68042.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (84 aa)
OBQ68092.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (122 aa)
Your Current Organism:
Mesorhizobium loti
NCBI taxonomy Id: 381
Other names: ATCC 700743, CCUG 27878, DSM 2626, IFO 14779, JCM 21464, LMG 6125, LMG:6125, M. loti, Mesorhizobium sp. LMG 6125, NBRC 14779, NZP 2213, Rhizobium loti
Server load: low (24%) [HD]