STRINGSTRING
h16_A2926 h16_A2926 h16_A2927 h16_A2927 h16_A3688 h16_A3688 h16_B0792 h16_B0792 h16_B0793 h16_B0793 h16_B0794 h16_B0794
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
h16_A2926TRAP-type transporter, small permease component; 4 TMHs. (200 aa)
h16_A2927TRAP-type transporter, large permease component; 12 TMHs. (571 aa)
h16_A3688TRAP-type transporter, periplasmic component; Part of the tripartite ATP-independent periplasmic (TRAP) transport system. (378 aa)
h16_B0792TRAP-type transporter, large permease component; 14 TMHs. (639 aa)
h16_B0793TRAP-type transporter, small permease component; 3 TMHs. (209 aa)
h16_B0794TRAP-type transporter, periplasmic component; Part of the tripartite ATP-independent periplasmic (TRAP) transport system. (347 aa)
Your Current Organism:
Cupriavidus necator
NCBI taxonomy Id: 381666
Other names: Alcaligenes eutropha H16, C. necator H16, Cupriavidus necator ATCC 17699, Cupriavidus necator H16, Ralstonia eutropha ATCC 17699, Ralstonia eutropha H16, Ralstonia eutropha str. H16, Ralstonia eutropha strain H16, Wautersia eutropha H16
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