STRINGSTRING
boxA boxA boxB boxB h16_B1914 h16_B1914 boxR boxR h16_B1916 h16_B1916 h16_B1917 h16_B1917
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
boxABenzoyl-CoA dioxygenase A; Unknown EC_number=1.13.14.-. (426 aa)
boxBBenzoyl-CoA dioxygenase B; Unknown EC_number=1.13.14.-. (475 aa)
h16_B1914Enoyl-CoA-hydratase/isomerase. (552 aa)
boxRTranscriptional Regulator; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. (320 aa)
h16_B1916Hypothetical protein. (154 aa)
h16_B1917Aldehyde dehydrogenase. (515 aa)
Your Current Organism:
Cupriavidus necator
NCBI taxonomy Id: 381666
Other names: Alcaligenes eutropha H16, C. necator H16, Cupriavidus necator ATCC 17699, Cupriavidus necator H16, Ralstonia eutropha ATCC 17699, Ralstonia eutropha H16, Ralstonia eutropha str. H16, Ralstonia eutropha strain H16, Wautersia eutropha H16
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