STRINGSTRING
h16_B0599 h16_B0599 bphD bphD h16_B0602 h16_B0602 h16_B0625 h16_B0625 h16_B0628 h16_B0628 h16_B0629 h16_B0629 h16_B0630 h16_B0630 h16_B0638 h16_B0638 h16_B0639 h16_B0639 h16_B0641 h16_B0641 h16_B0642 h16_B0642 h16_B0643 h16_B0643 h16_B0644 h16_B0644 h16_B0645 h16_B0645 h16_B0649 h16_B0649 h16_B0652 h16_B0652 bphC bphC h16_B0655 h16_B0655 h16_B0656 h16_B0656 h16_B0657 h16_B0657 h16_B0658 h16_B0658 h16_B0659 h16_B0659 h16_B0660 h16_B0660 h16_B0661 h16_B0661 h16_B0662 h16_B0662 h16_B0663 h16_B0663 h16_B0664 h16_B0664 h16_B0665 h16_B0665 h16_B0666 h16_B0666 hcaE hcaE
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
h16_B0599Oxidoreductase short-chain dehydrogenase/reductase family. (268 aa)
bphD2,6-dioxo-6-phenylhexa-3-enoate hydrolase. (290 aa)
h16_B0602Steroid delta-isomerase. (125 aa)
h16_B0625Transcriptional regulator, LuxR-family. (379 aa)
h16_B0628Conserved hypothetical protein. (372 aa)
h16_B0629Conserved hypothetical protein. (397 aa)
h16_B0630Short chain dehydrogenase. (263 aa)
h16_B0638Acyl-CoA dehydrogenase, short-chain specific. (397 aa)
h16_B06393-Oxosteroid 1-dehydrogenase. (584 aa)
h16_B0641Delta 4, 5-alpha steroid dehydrogenase. (568 aa)
h16_B06423-Beta-hydroxysteroid dehydrogenase. (254 aa)
h16_B0643Flavodoxin reductase (ferredoxin-NADPH reductase) family 1. (355 aa)
h16_B0644Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. (546 aa)
h16_B0645Conserved hypothetical protein. (154 aa)
h16_B06493-Beta-hydroxysteroid dehydrogenase. (252 aa)
h16_B0652Transcriptional regulator, LuxR-family. (395 aa)
bphCBiphenyl-2,3-diol 1,2-dioxygenase. (298 aa)
h16_B0655Acyl CoA:acetate/3-ketoacid CoA transferase,alpha subunit. (296 aa)
h16_B0656Acyl CoA:acetate/3-ketoacid CoA transferase,beta subunit. (266 aa)
h16_B0657Enoyl-CoA hydratase/carnithine racemase. (295 aa)
h16_B0658Dioxygenase related to 2-nitropropane dioxygenase. (360 aa)
h16_B0659Enoyl-CoA hydratase/carnithine racemase. (263 aa)
h16_B0660Acyl-CoA dehydrogenase. (388 aa)
h16_B0661Acyl-CoA dehydrogenase. (355 aa)
h16_B0662Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (383 aa)
h16_B0663Short chain alcohol dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (294 aa)
h16_B0664Acyl-CoA dehydrogenase. (387 aa)
h16_B0665Acyl-CoA dehydrogenase. (400 aa)
h16_B0666Short chain dehydrogenase. (267 aa)
hcaERing-hydroxylating dioxygenase with Rieske[2Fe-2S] domain. (366 aa)
Your Current Organism:
Cupriavidus necator
NCBI taxonomy Id: 381666
Other names: Alcaligenes eutropha H16, C. necator H16, Cupriavidus necator ATCC 17699, Cupriavidus necator H16, Ralstonia eutropha ATCC 17699, Ralstonia eutropha H16, Ralstonia eutropha str. H16, Ralstonia eutropha strain H16, Wautersia eutropha H16
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