Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| cheA1 | cheA2Y2 | H16_B0239 | H16_B2048 | Chemotaxis protein histidine kinase. | Chemotaxis specific sensory transducer kinase,group IIIA, containing a receiver domain (hybrid); REC (residues 630 to 745, 5e-21) with a complete phosphorylation pocket (DD-D55-S77-K98). | 0.466 |
| cheA1 | cheB1 | H16_B0239 | H16_B0243 | Chemotaxis protein histidine kinase. | Chemotaxis specific response regulator containing a methylesterase domain; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.998 |
| cheA1 | cheB2 | H16_B0239 | H16_B2049 | Chemotaxis protein histidine kinase. | Chemotaxis response regulator containing a methylesterase domain; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.977 |
| cheA1 | cheD1 | H16_B0239 | H16_B0242 | Chemotaxis protein histidine kinase. | Chemotaxis protein; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family. | 0.975 |
| cheA1 | cheR1 | H16_B0239 | H16_B0241 | Chemotaxis protein histidine kinase. | Chemotaxis specific methyltransferase; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. | 0.972 |
| cheA1 | cheR2 | H16_B0239 | H16_B2046 | Chemotaxis protein histidine kinase. | Methylase of chemotaxis methyl-accepting proteins. | 0.931 |
| cheA1 | cheV | H16_B0239 | H16_B2240 | Chemotaxis protein histidine kinase. | Chemotaxis specific response regulator containing a CheW-domain; REC (residues195 to 319, 8e-14) with a complete phosphorylation pocket (DD-D59-S95-K113). | 0.998 |
| cheA1 | cheW1 | H16_B0239 | H16_B0240 | Chemotaxis protein histidine kinase. | Chemotaxis protein. | 0.999 |
| cheA1 | cheW2a | H16_B0239 | H16_B2045 | Chemotaxis protein histidine kinase. | Chemotaxis signal transduction protein. | 0.935 |
| cheA1 | cheW2b | H16_B0239 | H16_B2047 | Chemotaxis protein histidine kinase. | Chemotaxis protein. | 0.835 |
| cheA1 | cheW3 | H16_B0239 | H16_B0231 | Chemotaxis protein histidine kinase. | Chemotaxis protein. | 0.997 |
| cheA1 | cheY1 | H16_B0239 | H16_B0244 | Chemotaxis protein histidine kinase. | Chemotaxis response regulator; REC (residues 7 to 122, 7e-23) with a complete phosphorylation pocket (DD-D56-T78-K112). | 0.979 |
| cheA1 | cheY3 | H16_B0239 | H16_B0230 | Chemotaxis protein histidine kinase. | Chemotaxis response regulator; REC (residues 6 to 120, 2e-25) with a complete phosphorylation pocket (DD-D55-S83-K98). | 0.954 |
| cheA1 | cheZ1 | H16_B0239 | H16_B0245 | Chemotaxis protein histidine kinase. | Chemotaxis specific phosphatase; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P). | 0.987 |
| cheA1 | h16_A2292 | H16_B0239 | H16_A2292 | Chemotaxis protein histidine kinase. | Methyl-accepting chemotaxis protein. | 0.993 |
| cheA1 | h16_B0228 | H16_B0239 | H16_B0228 | Chemotaxis protein histidine kinase. | Methyl-accepting chemotaxis protein. | 0.993 |
| cheA1 | h16_B0232 | H16_B0239 | H16_B0232 | Chemotaxis protein histidine kinase. | Methyl-accepting chemotaxis protein. | 0.992 |
| cheA1 | h16_B0233 | H16_B0239 | H16_B0233 | Chemotaxis protein histidine kinase. | Methyl-accepting chemotaxis protein. | 0.987 |
| cheA1 | h16_B1038 | H16_B0239 | H16_B1038 | Chemotaxis protein histidine kinase. | Aerotaxis sensor receptor (chemotaxis transducer) transmembrane protein; 1 TMHs. | 0.993 |
| cheA1 | h16_B1252 | H16_B0239 | H16_B1252 | Chemotaxis protein histidine kinase. | Methyl-accepting chemotaxis protein. | 0.938 |
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