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gdpD gdpD ugpQ ugpQ pldB pldB eutB eutB eutC eutC h16_B0831 h16_B0831 phnB phnB h16_B0833 h16_B0833 phnA phnA h16_B1947 h16_B1947 h16_B1948 h16_B1948 h16_B1953 h16_B1953 h16_B1954 h16_B1954
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
gdpDGlycerophosphoryl diester phosphodiesterase. (410 aa)
ugpQGlycerophosphoryl diester phosphodiesterase. (248 aa)
pldBLysophospholipase. (310 aa)
eutBEthanolamine ammonia-lyase heavy chain. (460 aa)
eutCEthanolamine ammonia-lyase light chain; Belongs to the EutC family. (261 aa)
h16_B0831Alcohol dehydrogenase, class IV. (363 aa)
phnB2-Phosphonopropionate transporter, MFS-type,OPAfamily; 12 TMHs. (434 aa)
h16_B0833NAD-dependent aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (481 aa)
phnAPhosphonoacetate hydrolase. (406 aa)
h16_B1947Glyceraldehyde-3 dehydrogenase; Belongs to the aldehyde dehydrogenase family. (487 aa)
h16_B1948Phosphonoacetate hydrolase. (420 aa)
h16_B1953(2-aminoethyl) phosphonate--pyruvate transaminase; Involved in phosphonate degradation; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. PhnW subfamily. (377 aa)
h16_B1954Hypothetical membrane protein. (268 aa)
Your Current Organism:
Cupriavidus necator
NCBI taxonomy Id: 381666
Other names: Alcaligenes eutropha H16, C. necator H16, Cupriavidus necator ATCC 17699, Cupriavidus necator H16, Ralstonia eutropha ATCC 17699, Ralstonia eutropha H16, Ralstonia eutropha str. H16, Ralstonia eutropha strain H16, Wautersia eutropha H16
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