STRINGSTRING
glcF glcF h16_A0368 h16_A0368 glpCD glpCD h16_A0595 h16_A0595 h16_A0638 h16_A0638 fdsA fdsA nuoI nuoI rnfB rnfB fixC fixC h16_A1391 h16_A1391 bdxA bdxA ccoG ccoG h16_A2591 h16_A2591 fdoH fdoH sdhB sdhB fdhB1 fdhB1 h16_A2940 h16_A2940 gltD gltD h16_B0091 h16_B0091 fdwA fdwA h16_B1744 h16_B1744 boxA boxA h16_B2243 h16_B2243 narH2 narH2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
glcF2-Hydroxy-acid oxidase, Fe-S subunit. (417 aa)
h16_A0368Ferredoxin. (86 aa)
glpCDDehydrogenase (FAD/FMN-containing) and Fe-S oxidoreductase (two domain protein). (1324 aa)
h16_A0595Uncharacterized Fe-S protein; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr); Belongs to the QueG family. (401 aa)
h16_A0638Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. (109 aa)
fdsANAD-dependent formate dehydrogenase alpha subunit. (959 aa)
nuoINADH dehydrogenase chain I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (163 aa)
rnfBPredicted NADH:ubiquinone oxidoreductase,subunit RnfB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily. (269 aa)
fixCElectron transfer flavoprotein ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone. (562 aa)
h16_A1391Uncharacterized conserved protein containing a ferredoxin-like domain. (470 aa)
bdxABenzoyl-CoA oxygenase component A. (416 aa)
ccoGPolyferredoxin; 5 TMHs. (492 aa)
h16_A2591Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. (107 aa)
fdoHFormate dehydrogenase beta subunit. (296 aa)
sdhBSuccinate dehydrogenase (Fe-S protein subunit); Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. (233 aa)
fdhB1Formate dehydrogenase iron-sulfur subunit; HybA. (225 aa)
h16_A2940Ferredoxin. (721 aa)
gltDGlutamate synthase [NADPH] small chain. (487 aa)
h16_B0091Iron-sulfur cluster-binding protein. (481 aa)
fdwATungsten-containing formate dehydrogenase alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (938 aa)
h16_B1744Sulfite reductase alpha subunit (flavoprotein). (383 aa)
boxABenzoyl-CoA dioxygenase A; Unknown EC_number=1.13.14.-. (426 aa)
h16_B2243Ferredoxin. (81 aa)
narH2Respiratory nitrate reductase beta chain (NarH). (516 aa)
Your Current Organism:
Cupriavidus necator
NCBI taxonomy Id: 381666
Other names: Alcaligenes eutropha H16, C. necator H16, Cupriavidus necator ATCC 17699, Cupriavidus necator H16, Ralstonia eutropha ATCC 17699, Ralstonia eutropha H16, Ralstonia eutropha str. H16, Ralstonia eutropha strain H16, Wautersia eutropha H16
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