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Fnod_0023 Fnod_0023 Fnod_0024 Fnod_0024 Fnod_0025 Fnod_0025 Fnod_0061 Fnod_0061 Fnod_0174 Fnod_0174 Fnod_0229 Fnod_0229 Fnod_0515 Fnod_0515 Fnod_0565 Fnod_0565 Fnod_0567 Fnod_0567 Fnod_0568 Fnod_0568 Fnod_0569 Fnod_0569 Fnod_0573 Fnod_0573 Fnod_0575 Fnod_0575 Fnod_0579 Fnod_0579 Fnod_0580 Fnod_0580 Fnod_0582 Fnod_0582 Fnod_0665 Fnod_0665 Fnod_0911 Fnod_0911 Fnod_1436 Fnod_1436 Fnod_1450 Fnod_1450 Fnod_1451 Fnod_1451 Fnod_1452 Fnod_1452 Fnod_1454 Fnod_1454 Fnod_1455 Fnod_1455 Fnod_1477 Fnod_1477 Fnod_1480 Fnod_1480 Fnod_1483 Fnod_1483 Fnod_1494 Fnod_1494 Fnod_1777 Fnod_1777 Fnod_1779 Fnod_1779
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Fnod_0023PFAM: UDP-glucose/GDP-mannose dehydrogenase; 6-phosphogluconate dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; KEGG: tpt:Tpet_0335 UDP-glucose 6-dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. (432 aa)
Fnod_0024PFAM: polysaccharide export protein; KEGG: tma:TM0638 polysaccharide export protein, putative. (1070 aa)
Fnod_0025PFAM: lipopolysaccharide biosynthesis protein; KEGG: tpt:Tpet_0285 lipopolysaccharide biosynthesis protein. (653 aa)
Fnod_0061PFAM: glycosyl transferase group 1; TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: tpt:Tpet_0172 glycosyl transferase, family 2. (478 aa)
Fnod_0174PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: tma:TM0668 pleiotropic regulatory protein; Belongs to the DegT/DnrJ/EryC1 family. (376 aa)
Fnod_0229PFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: tma:TM1034 UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. (355 aa)
Fnod_0515PFAM: O-antigen polymerase; KEGG: tma:TM0806 hypothetical protein. (1090 aa)
Fnod_0565PFAM: glycosyl transferase group 1; KEGG: stm:STM3719 UDP-D-galactose:(glucosyl)lipopolysaccharide alpha-1,6-D-galactosyltransferase. (381 aa)
Fnod_0567Glycosyltransferase-like protein; KEGG: gfo:GFO_1790 glycosyl transferase, group 1. (434 aa)
Fnod_0568PFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: tpt:Tpet_0308 UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. (355 aa)
Fnod_0569PFAM: glycosyl transferase group 1; KEGG: tma:TM0619 hypothetical protein. (394 aa)
Fnod_0573PFAM: polysaccharide biosynthesis protein; KEGG: ste:STER_1057 polysaccharide transporter, PST family. (477 aa)
Fnod_0575PFAM: sugar transferase; KEGG: tpt:Tpet_0296 sugar transferase. (416 aa)
Fnod_0579PFAM: glycosyl transferase group 1; KEGG: tma:TM0619 hypothetical protein. (398 aa)
Fnod_0580PFAM: glycosyl transferase group 1; KEGG: tte:TTE0655 predicted glycosyltransferase. (391 aa)
Fnod_0582PFAM: polysaccharide biosynthesis protein; KEGG: tma:TM0620 lipopolysaccharide biosynthesis protein. (479 aa)
Fnod_0665PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: tpt:Tpet_0346 DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family. (378 aa)
Fnod_0911Hypothetical protein. (203 aa)
Fnod_1436PFAM: sugar transferase; KEGG: csc:Csac_1093 sugar transferase. (329 aa)
Fnod_1450TIGRFAM: glucose-1-phosphate thymidyltransferase; PFAM: Nucleotidyl transferase; KEGG: tpt:Tpet_0065 glucose-1-phosphate thymidyltransferase. (376 aa)
Fnod_1451TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase; sucrose-6F-phosphate phosphohydrolase; Haloacid dehalogenase domain protein hydrolase type 3; KEGG: ctc:CTC00366 predicted hydrolase. (276 aa)
Fnod_1452KEGG: eba:ebA6236 hypothetical protein. (243 aa)
Fnod_1454PFAM: UDP-galactopyranose mutase; KEGG: cac:CAC2169 UDP-galactopyranose mutase. (370 aa)
Fnod_1455KEGG: lsl:LSL_0694 galactofuranosyltransferase. (350 aa)
Fnod_1477PFAM: glycosyl transferase family 2; TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: tma:TM0757 hypothetical protein. (877 aa)
Fnod_1480PFAM: transferase hexapeptide repeat containing protein; KEGG: tma:TM0759 acyltransferase, putative. (251 aa)
Fnod_1483Methyltransferase type 11; PFAM: glycosyl transferase group 1; TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; Methyltransferase type 11; Methyltransferase type 12; SMART: Tetratricopeptide domain protein; KEGG: tpt:Tpet_0172 glycosyl transferase, family 2. (885 aa)
Fnod_1494Polysaccharide biosynthesis protein CapD; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; CoA-binding domain protein; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: tpt:Tpet_1244 polysaccharide biosynthesis protein CapD. (606 aa)
Fnod_1777TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: glycosyl transferase WecB/TagA/CpsF; KEGG: tpt:Tpet_0109 glycosyl transferase, WecB/TagA/CpsF family; Belongs to the glycosyltransferase 26 family. (249 aa)
Fnod_1779PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: tpt:Tpet_0333 oxidoreductase domain protein. (326 aa)
Your Current Organism:
Fervidobacterium nodosum
NCBI taxonomy Id: 381764
Other names: F. nodosum Rt17-B1, Fervidobacterium nodosum Rt17-B1, Fervidobacterium nodosum str. Rt17-B1, Fervidobacterium nodosum strain Rt17-B1
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