STRINGSTRING
Fnod_0565 Fnod_0565 Fnod_0573 Fnod_0573 Fnod_1450 Fnod_1450 Fnod_1454 Fnod_1454 Fnod_1455 Fnod_1455
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Fnod_0565PFAM: glycosyl transferase group 1; KEGG: stm:STM3719 UDP-D-galactose:(glucosyl)lipopolysaccharide alpha-1,6-D-galactosyltransferase. (381 aa)
Fnod_0573PFAM: polysaccharide biosynthesis protein; KEGG: ste:STER_1057 polysaccharide transporter, PST family. (477 aa)
Fnod_1450TIGRFAM: glucose-1-phosphate thymidyltransferase; PFAM: Nucleotidyl transferase; KEGG: tpt:Tpet_0065 glucose-1-phosphate thymidyltransferase. (376 aa)
Fnod_1454PFAM: UDP-galactopyranose mutase; KEGG: cac:CAC2169 UDP-galactopyranose mutase. (370 aa)
Fnod_1455KEGG: lsl:LSL_0694 galactofuranosyltransferase. (350 aa)
Your Current Organism:
Fervidobacterium nodosum
NCBI taxonomy Id: 381764
Other names: F. nodosum Rt17-B1, Fervidobacterium nodosum Rt17-B1, Fervidobacterium nodosum str. Rt17-B1, Fervidobacterium nodosum strain Rt17-B1
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