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Fnod_0583 Fnod_0583 Fnod_1742 Fnod_1742 Fnod_1741 Fnod_1741 Fnod_1740 Fnod_1740 Fnod_1739 Fnod_1739 Fnod_1738 Fnod_1738 Fnod_1737 Fnod_1737 Fnod_1573 Fnod_1573 Fnod_1311 Fnod_1311 Fnod_1173 Fnod_1173 Fnod_0995 Fnod_0995 Fnod_0994 Fnod_0994 Fnod_0993 Fnod_0993 Fnod_0992 Fnod_0992 Fnod_0991 Fnod_0991 Fnod_0677 Fnod_0677 Fnod_0633 Fnod_0633 rnfA-2 rnfA-2 Fnod_0629 Fnod_0629 Fnod_0002 Fnod_0002 Fnod_0043 Fnod_0043 Fnod_0044 Fnod_0044 Fnod_0053 Fnod_0053 Fnod_0054 Fnod_0054 Fnod_0056 Fnod_0056 Fnod_0112 Fnod_0112 Fnod_0113 Fnod_0113 Fnod_0225 Fnod_0225 Fnod_0226 Fnod_0226 Fnod_0227 Fnod_0227 Fnod_0318 Fnod_0318 Fnod_0319 Fnod_0319 Fnod_0339 Fnod_0339 Fnod_0356 Fnod_0356 rnfC rnfC rnfD rnfD rnfG rnfG rnfE rnfE rnfA rnfA Fnod_0584 Fnod_0584
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Fnod_0583PFAM: Electron transfer flavoprotein alpha/beta-subunit; Electron transfer flavoprotein alpha subunit; KEGG: ctc:CTC00712 electron transfer flavoprotein alpha-subunit fixB. (341 aa)
Fnod_1742PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: tma:TM1211 putative NADH dehydrogenase I chain N. (457 aa)
Fnod_1741NADH dehydrogenase (quinone); PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: tma:TM1212 NADH dehydrogenase I chain M. (604 aa)
Fnod_1740PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: tma:TM1213 NADH dehydrogenase I chain H. (291 aa)
Fnod_1739PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: tma:TM1214 NADH dehydrogenase I chain B. (181 aa)
Fnod_1738PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; KEGG: tma:TM1215 NADH dehydrogenase I chain C. (187 aa)
Fnod_1737NADH dehydrogenase (quinone); PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; KEGG: tma:TM1216 NADH dehydrogenase I chain D; Belongs to the complex I 49 kDa subunit family. (367 aa)
Fnod_1573PFAM: Fe-S cluster domain protein; KEGG: tpt:Tpet_0675 Fe-S cluster domain protein. (92 aa)
Fnod_1311PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: tma:TM0879 ferredoxin. (82 aa)
Fnod_1173Flavodoxin; KEGG: pfu:PF0633 flavodoxin. (152 aa)
Fnod_0995PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: tma:TM0012 NADH dehydrogenase I chain E. (164 aa)
Fnod_0994KEGG: tpt:Tpet_0912 ferredoxin-like protein. (126 aa)
Fnod_0993NADH dehydrogenase (quinone); PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: tpt:Tpet_0913 NADH dehydrogenase (quinone). (610 aa)
Fnod_0992TIGRFAM: NADH-quinone oxidoreductase, E subunit; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: tpt:Tpet_0697 NADH-quinone oxidoreductase, E subunit. (161 aa)
Fnod_0991PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: tpt:Tpet_0696 NADH dehydrogenase (quinone). (539 aa)
Fnod_0677PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: tpt:Tpet_0272 rubredoxin-type Fe(Cys)4 protein. (53 aa)
Fnod_0633TIGRFAM: NADH:ubiquinone oxidoreductase, subunit F; PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: ngo:NGO1418 NqrF. (369 aa)
rnfA-2RnfA-Nqr electron transport subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. (197 aa)
Fnod_0629PFAM: NQR2 and RnfD family protein; KEGG: neu:NE2396 Na+-translocating NADH:ubiquinone oxidoreductase subunit Nrq2. (313 aa)
Fnod_0002PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: tpt:Tpet_0002 tRNA (guanine-N(7)-)-methyltransferase. (60 aa)
Fnod_0043PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: tpt:Tpet_0515 thiamine pyrophosphate enzyme domain protein TPP-binding. (273 aa)
Fnod_0044PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; KEGG: tpt:Tpet_0514 pyruvate ferredoxin/flavodoxin oxidoreductase. (198 aa)
Fnod_0053Indolepyruvate ferredoxin oxidoreductase; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates. (623 aa)
Fnod_0054PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; KEGG: mse:Msed_1596 pyruvate ferredoxin/flavodoxin oxidoreductase. (196 aa)
Fnod_0056TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: tpt:Tpet_1584 pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit. (276 aa)
Fnod_0112PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: tpt:Tpet_1047 thiamine pyrophosphate enzyme domain protein TPP-binding. (251 aa)
Fnod_0113TIGRFAM: pyruvate/ketoisovalerate oxidoreductase, gamma subunit; PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; KEGG: tpt:Tpet_1048 pyruvate ferredoxin/flavodoxin oxidoreductase. (179 aa)
Fnod_0225TIGRFAM: hydrogenase, Fe-only; PFAM: ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; iron hydrogenase small subunit; hydrogenase large subunit domain protein; KEGG: tma:TM1426 NADH dehydrogenase I chain G. (667 aa)
Fnod_0226NADH dehydrogenase (quinone); PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: tma:TM1425 NADH dehydrogenase I chain F. (632 aa)
Fnod_0227PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: tma:TM1424 NADH dehydrogenase I chain E. (157 aa)
Fnod_0318PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: tpt:Tpet_1371 4Fe-4S ferredoxin, iron-sulfur binding domain protein. (550 aa)
Fnod_0319NADH:ubiquinone oxidoreductase 24 kD subunit-like protein; KEGG: cbo:CBO1829 hypothetical protein. (96 aa)
Fnod_0339PFAM: beta-lactamase domain protein; flavodoxin/nitric oxide synthase; KEGG: bfs:BF0904 putative flavoprotein. (396 aa)
Fnod_0356PFAM: beta-lactamase domain protein; KEGG: tma:TM0013 hypothetical protein. (259 aa)
rnfCElectron transport complex, RnfABCDGE type, C subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily. (435 aa)
rnfDElectron transport complex, RnfABCDGE type, D subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family. (325 aa)
rnfGElectron transport complex, RnfABCDGE type, G subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the RnfG family. (229 aa)
rnfEElectron transport complex, RnfABCDGE type, E subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. (217 aa)
rnfAElectron transport complex, RnfABCDGE type, A subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. (190 aa)
Fnod_0584PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: cbo:CBO3198 electron transfer flavoprotein beta-subunit. (260 aa)
Your Current Organism:
Fervidobacterium nodosum
NCBI taxonomy Id: 381764
Other names: F. nodosum Rt17-B1, Fervidobacterium nodosum Rt17-B1, Fervidobacterium nodosum str. Rt17-B1, Fervidobacterium nodosum strain Rt17-B1
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