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Fnod_0043 Fnod_0043 Fnod_0055 Fnod_0055 Fnod_0056 Fnod_0056 buk buk Fnod_0107 Fnod_0107 buk-2 buk-2 Fnod_0111 Fnod_0111 Fnod_0112 Fnod_0112 Fnod_0206 Fnod_0206 Fnod_0211 Fnod_0211 Fnod_0212 Fnod_0212 Fnod_0314 Fnod_0314 Fnod_0532 Fnod_0532 Fnod_0585 Fnod_0585 Fnod_0863 Fnod_0863 Fnod_0864 Fnod_0864 Fnod_0865 Fnod_0865 Fnod_0866 Fnod_0866 Fnod_1275 Fnod_1275 Fnod_1310 Fnod_1310 Fnod_1312 Fnod_1312 Fnod_1318 Fnod_1318 Fnod_1319 Fnod_1319 Fnod_1789 Fnod_1789
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Fnod_0043PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: tpt:Tpet_0515 thiamine pyrophosphate enzyme domain protein TPP-binding. (273 aa)
Fnod_0055PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: tpt:Tpet_1585 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein. (561 aa)
Fnod_0056TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: tpt:Tpet_1584 pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit. (276 aa)
bukTIGRFAM: Butyrate kinase; PFAM: acetate and butyrate kinase; KEGG: tpt:Tpet_1041 butyrate kinase; Belongs to the acetokinase family. (357 aa)
Fnod_0107PFAM: phosphate acetyl/butaryl transferase; KEGG: tma:TM1130 phosphate acetyltransferase. (296 aa)
buk-2TIGRFAM: Butyrate kinase; PFAM: acetate and butyrate kinase; KEGG: tma:TM1756 putative butyrate kinase 2; Belongs to the acetokinase family. (361 aa)
Fnod_0111PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: tpt:Tpet_1046 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein. (353 aa)
Fnod_0112PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: tpt:Tpet_1047 thiamine pyrophosphate enzyme domain protein TPP-binding. (251 aa)
Fnod_0206PFAM: MaoC domain protein dehydratase; KEGG: MaoC family protein. (133 aa)
Fnod_0211TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase; KEGG: rru:Rru_A1471 butyrate-acetoacetate CoA-transferase. (216 aa)
Fnod_0212TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase; KEGG: tte:TTE0720 Acyl-CoA:acetate CoA transferase alpha subunit. (217 aa)
Fnod_0314TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; KEGG: cps:CPS_2626 acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (400 aa)
Fnod_0532KEGG: tte:TTE0554 acetyl-CoA hydrolase. (432 aa)
Fnod_0585PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: tte:TTE0545 Acyl-CoA dehydrogenases. (379 aa)
Fnod_0863PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: tpt:Tpet_0905 thiamine pyrophosphate enzyme domain protein TPP-binding. (324 aa)
Fnod_0864PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: tpt:Tpet_0906 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein. (389 aa)
Fnod_0865TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: tpt:Tpet_0907 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit. (116 aa)
Fnod_0866TIGRFAM: pyruvate/ketoisovalerate oxidoreductase, gamma subunit; PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; KEGG: tpt:Tpet_0908 pyruvate/ketoisovalerate oxidoreductase, gamma subunit. (217 aa)
Fnod_1275TIGRFAM: sodium ion-translocating decarboxylase, beta subunit; PFAM: Na+transporting methylmalonyl-CoA/oxaloacetate decarboxylase beta subunit; KEGG: tte:TTE0252 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit. (376 aa)
Fnod_1310TIGRFAM: sodium ion-translocating decarboxylase, beta subunit; PFAM: Na+transporting methylmalonyl-CoA/oxaloacetate decarboxylase beta subunit; KEGG: tma:TM0880 oxaloacetate decarboxylase, beta subunit. (383 aa)
Fnod_1312PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: tma:TM0878 2-oxoglutarate ferredoxin oxidoreductase, alpha subunit. (389 aa)
Fnod_1318Hypothetical protein. (133 aa)
Fnod_1319PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: tma:TM0717 methylmalonyl-CoA decarboxylase gamma chain. (147 aa)
Fnod_1789PFAM: phosphate acetyl/butaryl transferase; KEGG: tte:TTE2204 phosphotransacetylase. (293 aa)
Your Current Organism:
Fervidobacterium nodosum
NCBI taxonomy Id: 381764
Other names: F. nodosum Rt17-B1, Fervidobacterium nodosum Rt17-B1, Fervidobacterium nodosum str. Rt17-B1, Fervidobacterium nodosum strain Rt17-B1
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