(46 nodes) Mixed, incl. Zinc finger, Dof-type, and Positive regulation of lipid biosynthetic process network (Arachis hypogaea)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A444WN41	Uncharacterized protein. (120 aa)
	A0A444WNN4	AP2/ERF domain-containing protein. (174 aa)
	A0A444WP77	AP2/ERF domain-containing protein. (280 aa)
	A0A444WQ52	Uncharacterized protein. (271 aa)
	A0A444WUB3	Uncharacterized protein. (235 aa)
	Ahy_B10g101082	Dof-type domain-containing protein. (231 aa)
	Ahy_B10g105707	AP2/ERF domain-containing protein. (98 aa)
	Ahy_B09g094624	Uncharacterized protein. (308 aa)
	Ahy_B09g099504	Protein kinase domain-containing protein. (771 aa)
	Ahy_B09g099327	AP2/ERF domain-containing protein. (636 aa)
	Ahy_B08g094184	Dof-type domain-containing protein. (212 aa)
	Ahy_B07g086212	AP2/ERF domain-containing protein. (165 aa)
	Ahy_B06g086000	AP2/ERF domain-containing protein. (193 aa)
	Ahy_B05g078697	Uncharacterized protein. (228 aa)
	Ahy_B05g079603	AP2/ERF domain-containing protein. (134 aa)
	Ahy_B04g072684	Uncharacterized protein. (118 aa)
	Ahy_B03g061708	Dof-type domain-containing protein. (181 aa)
	Ahy_B03g062319	Uncharacterized protein. (200 aa)
	Ahy_B03g063203	Dof-type domain-containing protein. (210 aa)
	Ahy_B03g067345	Uncharacterized protein. (316 aa)
	Ahy_B03g067573	Uncharacterized protein. (228 aa)
	Ahy_B01g053516	Uncharacterized protein. (269 aa)
	Ahy_B01g054947	Uncharacterized protein. (600 aa)
	Ahy_B01g056681	AP2/ERF domain-containing protein. (256 aa)
	Ahy_A10g048281	Protein kinase domain-containing protein. (699 aa)
	Ahy_A10g051100	Dof-type domain-containing protein. (227 aa)
	Ahy_A09g041758	Protein kinase domain-containing protein. (669 aa)
	Ahy_A09g042397	Uncharacterized protein. (192 aa)
	Ahy_A09g046451	Protein kinase domain-containing protein. (708 aa)
	Ahy_A09g046708	Uncharacterized protein. (299 aa)
	Ahy_A08g038102	Dof-type domain-containing protein. (265 aa)
	Ahy_A08g039187	Dof-type domain-containing protein. (185 aa)
	Ahy_A08g039397	Uncharacterized protein. (149 aa)
	Ahy_A08g039395	Uncharacterized protein. (225 aa)
	Ahy_A07g034159	Dof-type domain-containing protein. (236 aa)
	Ahy_A06g025948	AP2/ERF domain-containing protein. (252 aa)
	Ahy_A06g030927	AP2/ERF domain-containing protein. (197 aa)
	Ahy_A05g021863	AP2/ERF domain-containing protein. (342 aa)
	Ahy_A05g022784	Protein kinase domain-containing protein. (171 aa)
	Ahy_A04g017504	Uncharacterized protein. (113 aa)
	Ahy_A04g019534	Uncharacterized protein. (118 aa)
	Ahy_A03g011543	Dof-type domain-containing protein. (203 aa)
	Ahy_A02g005640	Uncharacterized protein. (332 aa)
	Ahy_A02g009898	AP2/ERF domain-containing protein. (511 aa)
	Ahy_A01g000201	AP2/ERF domain-containing protein. (252 aa)
	Ahy_A01g003006	Uncharacterized protein. (274 aa)

Your Current Organism:

Arachis hypogaea

NCBI taxonomy Id: 3818
Other names: A. hypogaea, Arachis hypogaea L., goober, ground-nut, peanut

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A444WN41	A0A444WNN4	A0A444WN41	A0A444WNN4	Uncharacterized protein.	AP2/ERF domain-containing protein.	0.480
A0A444WN41	A0A444WP77	A0A444WN41	A0A444WP77	Uncharacterized protein.	AP2/ERF domain-containing protein.	0.483
A0A444WN41	A0A444WQ52	A0A444WN41	A0A444WQ52	Uncharacterized protein.	Uncharacterized protein.	0.689
A0A444WN41	A0A444WUB3	A0A444WN41	A0A444WUB3	Uncharacterized protein.	Uncharacterized protein.	0.664
A0A444WN41	Ahy_A01g000201	A0A444WN41	A0A445EJJ6	Uncharacterized protein.	AP2/ERF domain-containing protein.	0.484
A0A444WN41	Ahy_A01g003006	A0A444WN41	A0A445ES00	Uncharacterized protein.	Uncharacterized protein.	0.654
A0A444WN41	Ahy_A02g005640	A0A444WN41	A0A445E7T7	Uncharacterized protein.	Uncharacterized protein.	0.518
A0A444WN41	Ahy_A02g009898	A0A444WN41	A0A445EIF5	Uncharacterized protein.	AP2/ERF domain-containing protein.	0.480
A0A444WN41	Ahy_A03g011543	A0A444WN41	A0A445DR27	Uncharacterized protein.	Dof-type domain-containing protein.	0.517
A0A444WN41	Ahy_A04g017504	A0A444WN41	A0A445DBA2	Uncharacterized protein.	Uncharacterized protein.	0.530
A0A444WN41	Ahy_A05g021863	A0A444WN41	A0A445CYP1	Uncharacterized protein.	AP2/ERF domain-containing protein.	0.477
A0A444WN41	Ahy_A06g025948	A0A444WN41	A0A445CJ35	Uncharacterized protein.	AP2/ERF domain-containing protein.	0.426
A0A444WN41	Ahy_A06g030927	A0A444WN41	A0A445CXU4	Uncharacterized protein.	AP2/ERF domain-containing protein.	0.487
A0A444WN41	Ahy_A07g034159	A0A444WN41	A0A445CB75	Uncharacterized protein.	Dof-type domain-containing protein.	0.516
A0A444WN41	Ahy_A08g038102	A0A444WN41	A0A445BSL0	Uncharacterized protein.	Dof-type domain-containing protein.	0.516
A0A444WN41	Ahy_A08g039187	A0A444WN41	A0A445BVJ6	Uncharacterized protein.	Dof-type domain-containing protein.	0.530
A0A444WN41	Ahy_A08g039395	A0A444WN41	A0A445BW63	Uncharacterized protein.	Uncharacterized protein.	0.495
A0A444WN41	Ahy_A08g039397	A0A444WN41	A0A445BW52	Uncharacterized protein.	Uncharacterized protein.	0.504
A0A444WN41	Ahy_A09g041758	A0A444WN41	A0A445BDR1	Uncharacterized protein.	Protein kinase domain-containing protein.	0.427
A0A444WN41	Ahy_A09g042397	A0A444WN41	A0A445BFR9	Uncharacterized protein.	Uncharacterized protein.	0.590