(23 nodes) Double-strand break repair via nonhomologous end joining, and APEX1-Independent Resolution of AP Sites via the Single Nucleotide Replacement Pathway network (Arachis hypogaea)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Ahy_B10g104682	SAM domain-containing protein. (729 aa)
	Ahy_B09g097929	Uncharacterized protein. (259 aa)
	Ahy_B09g099420	SAP domain-containing protein. (630 aa)
	Ahy_B08g093345	Ku_C domain-containing protein. (124 aa)
	Ahy_B06g085568	Uncharacterized protein. (301 aa)
	Ahy_B05g076488	MCM domain-containing protein. (102 aa)
	Ahy_B04g070556	DNA ligase. (1171 aa)
	Ahy_B04g072925	BRCT domain-containing protein. (366 aa)
	Ahy_B02g061260	Macro domain-containing protein. (757 aa)
	Ahy_B02g061572	Cyclin; Belongs to the cyclin family. (243 aa)
	Ahy_A10g048298	SAM domain-containing protein. (730 aa)
	Ahy_A09g041698	SAP domain-containing protein. (630 aa)
	Ahy_A08g038853	Uncharacterized protein. (83 aa)
	Ahy_A06g027406	Cyclin; Belongs to the cyclin family. (194 aa)
	Ahy_A06g030417	Uncharacterized protein. (216 aa)
	Ahy_A05g024385	DNA_LIGASE_A3 domain-containing protein. (214 aa)
	Ahy_A05g025425	BRCT domain-containing protein; Belongs to the DNA polymerase type-X family. (596 aa)
	Ahy_A04g019310	BRCT domain-containing protein. (366 aa)
	Ahy_A04g020334	Uncharacterized protein. (1225 aa)
	Ahy_A02g005336	Uncharacterized protein. (1386 aa)
	Ahy_A02g006247	Uncharacterized protein; Belongs to the GST superfamily. (2277 aa)
	Ahy_A02g006246	ATP-dependent DNA helicase 2 subunit KU80; Single-stranded DNA-dependent ATP-dependent helicase. (650 aa)
	Ahy_A02g006659	Macro domain-containing protein. (757 aa)

Your Current Organism:

Arachis hypogaea

NCBI taxonomy Id: 3818
Other names: A. hypogaea, Arachis hypogaea L., goober, ground-nut, peanut

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Ahy_A02g005336	Ahy_A02g006659	A0A445E6G3	A0A445EAW4	Uncharacterized protein.	Macro domain-containing protein.	0.739
Ahy_A02g005336	Ahy_A04g019310	A0A445E6G3	A0A445DFP7	Uncharacterized protein.	BRCT domain-containing protein.	0.474
Ahy_A02g005336	Ahy_A04g020334	A0A445E6G3	A0A445DHH8	Uncharacterized protein.	Uncharacterized protein.	0.981
Ahy_A02g005336	Ahy_A05g024385	A0A445E6G3	A0A445D5N8	Uncharacterized protein.	DNA_LIGASE_A3 domain-containing protein.	0.981
Ahy_A02g005336	Ahy_A05g025425	A0A445E6G3	A0A445D8N9	Uncharacterized protein.	BRCT domain-containing protein; Belongs to the DNA polymerase type-X family.	0.845
Ahy_A02g005336	Ahy_A06g027406	A0A445E6G3	A0A445CNL8	Uncharacterized protein.	Cyclin; Belongs to the cyclin family.	0.900
Ahy_A02g005336	Ahy_A06g030417	A0A445E6G3	A0A445CWB6	Uncharacterized protein.	Uncharacterized protein.	0.877
Ahy_A02g005336	Ahy_A08g038853	A0A445E6G3	A0A445BUY4	Uncharacterized protein.	Uncharacterized protein.	0.877
Ahy_A02g005336	Ahy_A09g041698	A0A445E6G3	A0A445BDI8	Uncharacterized protein.	SAP domain-containing protein.	0.994
Ahy_A02g005336	Ahy_A10g048298	A0A445E6G3	A0A445B4T5	Uncharacterized protein.	SAM domain-containing protein.	0.925
Ahy_A02g005336	Ahy_B02g061260	A0A445E6G3	A0A445AKG4	Uncharacterized protein.	Macro domain-containing protein.	0.738
Ahy_A02g005336	Ahy_B02g061572	A0A445E6G3	A0A445ALF2	Uncharacterized protein.	Cyclin; Belongs to the cyclin family.	0.900
Ahy_A02g005336	Ahy_B04g070556	A0A445E6G3	A0A444ZHL5	Uncharacterized protein.	DNA ligase.	0.981
Ahy_A02g005336	Ahy_B04g072925	A0A445E6G3	A0A444ZP63	Uncharacterized protein.	BRCT domain-containing protein.	0.474
Ahy_A02g005336	Ahy_B05g076488	A0A445E6G3	A0A444Z3E1	Uncharacterized protein.	MCM domain-containing protein.	0.877
Ahy_A02g005336	Ahy_B06g085568	A0A445E6G3	A0A444YUY9	Uncharacterized protein.	Uncharacterized protein.	0.877
Ahy_A02g005336	Ahy_B08g093345	A0A445E6G3	A0A444Y5W7	Uncharacterized protein.	Ku_C domain-containing protein.	0.994
Ahy_A02g005336	Ahy_B09g097929	A0A445E6G3	A0A444XQC7	Uncharacterized protein.	Uncharacterized protein.	0.969
Ahy_A02g005336	Ahy_B09g099420	A0A445E6G3	A0A444XTU7	Uncharacterized protein.	SAP domain-containing protein.	0.994
Ahy_A02g005336	Ahy_B10g104682	A0A445E6G3	A0A444X692	Uncharacterized protein.	SAM domain-containing protein.	0.925