(61 nodes) Glycosphingolipid biosynthesis - ganglio series network (Arachis hypogaea)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Ahy_A03g014104	Beta-galactosidase. (721 aa)
	A0A444WUS2	Beta-galactosidase. (829 aa)
	Ahy_B10g100825	Uncharacterized protein. (361 aa)
	Ahy_B10g102162	Glyco_hydro_35 domain-containing protein. (353 aa)
	Ahy_B09g095193	Beta-galactosidase. (845 aa)
	Ahy_B09g099053	Beta-galactosidase. (834 aa)
	Ahy_B09g099560	Beta-hexosaminidase. (546 aa)
	Ahy_B08g089197	Beta-galactosidase. (680 aa)
	Ahy_B08g089198	Beta-galactosidase. (841 aa)
	Ahy_B08g089911	Uncharacterized protein. (409 aa)
	Ahy_B08g090733	Glyco_hydro_35 domain-containing protein. (280 aa)
	Ahy_B08g091017	Beta-hexosaminidase. (592 aa)
	Ahy_B08g092748	Glyco_hydro_35 domain-containing protein. (223 aa)
	Ahy_B08g094098	Beta-galactosidase. (839 aa)
	Ahy_B08g094380	Beta-galactosidase. (705 aa)
	Ahy_B08g094391	Beta-galactosidase. (851 aa)
	Ahy_B07g086266	Glyco_hydro_35 domain-containing protein. (110 aa)
	Ahy_B06g079846	Beta-galactosidase. (1607 aa)
	Ahy_B06g079864	Beta-galactosidase. (728 aa)
	Ahy_B05g079277	Beta-galactosidase. (845 aa)
	Ahy_B04g069764	Glyco_hydro_35 domain-containing protein. (147 aa)
	Ahy_B03g061750	Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX. (329 aa)
	Ahy_B03g063594	Uncharacterized protein. (170 aa)
	Ahy_B03g063759	Beta-galactosidase. (716 aa)
	Ahy_B03g065704	Beta-galactosidase. (721 aa)
	Ahy_B03g067960	Beta-galactosidase. (828 aa)
	Ahy_B03g068500	Beta-galactosidase. (943 aa)
	Ahy_B03g068786	Beta-galactosidase. (993 aa)
	Ahy_B03g068789	Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX. (364 aa)
	Ahy_B01g052469	Beta-galactosidase. (834 aa)
	Ahy_B01g054991	SUEL-type lectin domain-containing protein. (837 aa)
	Ahy_B01g056588	Usp domain-containing protein. (229 aa)
	Ahy_B01g056594	Usp domain-containing protein. (241 aa)
	Ahy_A09g041488	Beta-galactosidase. (1174 aa)
	Ahy_A09g041810	Beta-hexosaminidase. (546 aa)
	Ahy_A09g046216	Beta-galactosidase. (845 aa)
	Ahy_A08g037573	Beta-galactosidase. (753 aa)
	Ahy_A08g037819	Beta-galactosidase. (857 aa)
	Ahy_A08g038264	Beta-galactosidase. (625 aa)
	Ahy_A08g038259	Beta-galactosidase. (595 aa)
	Ahy_A08g038958	Beta-galactosidase. (703 aa)
	Ahy_A08g039298	Beta-galactosidase. (865 aa)
	Ahy_A08g040978	Beta-galactosidase. (713 aa)
	Ahy_A08g040977	Beta-galactosidase. (841 aa)
	Ahy_A07g034558	Beta-galactosidase. (753 aa)
	Ahy_A07g036080	Beta-hexosaminidase. (590 aa)
	Ahy_A06g026284	Beta-galactosidase. (728 aa)
	Ahy_A06g028605	Glyco_hydro_35 domain-containing protein. (76 aa)
	Ahy_A04g019356	Uncharacterized protein. (66 aa)
	Ahy_A04g019937	Uncharacterized protein. (189 aa)
	Ahy_A03g012219	Beta-galactosidase. (713 aa)
	Ahy_A03g013256	Glyco_hydro_35 domain-containing protein. (176 aa)
	Ahy_A03g015431	Uncharacterized protein. (346 aa)
	Ahy_A03g016419	Beta-galactosidase. (828 aa)
	Ahy_A03g016863	Beta-galactosidase. (1697 aa)
	Ahy_A02g008456	Glyco_hydro_35 domain-containing protein. (145 aa)
	Ahy_A01g000246	Usp domain-containing protein. (223 aa)
	Ahy_A01g000248	Usp domain-containing protein. (242 aa)
	Ahy_A01g001608	SUEL-type lectin domain-containing protein. (837 aa)
	Ahy_A01g002852	Glyco_hydro_35 domain-containing protein. (116 aa)
	Ahy_A01g004796	Beta-galactosidase. (850 aa)

Your Current Organism:

Arachis hypogaea

NCBI taxonomy Id: 3818
Other names: A. hypogaea, Arachis hypogaea L., goober, ground-nut, peanut

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A444WUS2	Ahy_A07g036080	A0A444WUS2	A0A445CF76	Beta-galactosidase.	Beta-hexosaminidase.	0.554
A0A444WUS2	Ahy_A09g041810	A0A444WUS2	A0A445BDT8	Beta-galactosidase.	Beta-hexosaminidase.	0.554
A0A444WUS2	Ahy_B08g091017	A0A444WUS2	A0A444Y171	Beta-galactosidase.	Beta-hexosaminidase.	0.554
A0A444WUS2	Ahy_B09g099560	A0A444WUS2	A0A444XU92	Beta-galactosidase.	Beta-hexosaminidase.	0.554
Ahy_A01g000246	Ahy_A03g015431	A0A445EJR0	A0A445E0M1	Usp domain-containing protein.	Uncharacterized protein.	0.434
Ahy_A01g000246	Ahy_A07g036080	A0A445EJR0	A0A445CF76	Usp domain-containing protein.	Beta-hexosaminidase.	0.554
Ahy_A01g000246	Ahy_A09g041810	A0A445EJR0	A0A445BDT8	Usp domain-containing protein.	Beta-hexosaminidase.	0.554
Ahy_A01g000246	Ahy_B08g091017	A0A445EJR0	A0A444Y171	Usp domain-containing protein.	Beta-hexosaminidase.	0.554
Ahy_A01g000246	Ahy_B09g099560	A0A445EJR0	A0A444XU92	Usp domain-containing protein.	Beta-hexosaminidase.	0.554
Ahy_A01g000248	Ahy_A03g015431	A0A445EJS8	A0A445E0M1	Usp domain-containing protein.	Uncharacterized protein.	0.473
Ahy_A01g000248	Ahy_A07g036080	A0A445EJS8	A0A445CF76	Usp domain-containing protein.	Beta-hexosaminidase.	0.554
Ahy_A01g000248	Ahy_A09g041810	A0A445EJS8	A0A445BDT8	Usp domain-containing protein.	Beta-hexosaminidase.	0.554
Ahy_A01g000248	Ahy_B08g091017	A0A445EJS8	A0A444Y171	Usp domain-containing protein.	Beta-hexosaminidase.	0.554
Ahy_A01g000248	Ahy_B09g099560	A0A445EJS8	A0A444XU92	Usp domain-containing protein.	Beta-hexosaminidase.	0.554
Ahy_A01g001608	Ahy_A07g036080	A0A445EP36	A0A445CF76	SUEL-type lectin domain-containing protein.	Beta-hexosaminidase.	0.826
Ahy_A01g001608	Ahy_A08g038958	A0A445EP36	A0A445BUV0	SUEL-type lectin domain-containing protein.	Beta-galactosidase.	0.820
Ahy_A01g001608	Ahy_A09g041810	A0A445EP36	A0A445BDT8	SUEL-type lectin domain-containing protein.	Beta-hexosaminidase.	0.826
Ahy_A01g001608	Ahy_B08g091017	A0A445EP36	A0A444Y171	SUEL-type lectin domain-containing protein.	Beta-hexosaminidase.	0.826
Ahy_A01g001608	Ahy_B08g094380	A0A445EP36	A0A444Y8S4	SUEL-type lectin domain-containing protein.	Beta-galactosidase.	0.819
Ahy_A01g001608	Ahy_B09g099560	A0A445EP36	A0A444XU92	SUEL-type lectin domain-containing protein.	Beta-hexosaminidase.	0.826