(49 nodes) Mixed, incl. Nickel cation transmembrane transporter activity, and Peptide transport network (Sinorhizobium meliloti)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AIL97999.1	Microcin ABC transporter ATP-binding protein; With YejAEF is involved in resistance to microcin C; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (542 aa)
	AIL98000.1	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (377 aa)
	yejB	Microcin ABC transporter permease; With YejAEF is involved in resistance to microcin C; Derived by automated computational analysis using gene prediction method: Protein Homology. (360 aa)
	AIL98002.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (619 aa)
	AIL98556.1	Peptide ABC transporter substrate-binding protein; DppABCDF is involved in the transport of dipeptides; also binds heme and mediates chemotaxis to dipeptides; Derived by automated computational analysis using gene prediction method: Protein Homology. (531 aa)
	AIL98557.1	Peptide ABC transporter permease; Transports peptides consisting of two or three amino acids; Derived by automated computational analysis using gene prediction method: Protein Homology. (334 aa)
	AIL98558.1	Peptide transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (302 aa)
	AIL98559.1	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (275 aa)
	AIL99513.1	Bicyclomycin resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (604 aa)
	AIL99817.1	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (593 aa)
	AIL99820.1	Glutathione ABC transporter permease; With GsiABD is involved in the transport of glutathione into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology. (306 aa)
	AIL99821.1	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (298 aa)
	AIM00199.1	NADPH dependend quinone reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (300 aa)
	AIM00202.1	acyl-CoA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (687 aa)
	AIM00203.1	Catalyzes the dehydration of L-carnitinyl-CoA to crotonobetainyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the enoyl-CoA hydratase/isomerase family. (260 aa)
	AIM00204.1	Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (529 aa)
	AIM00205.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (369 aa)
	AIM00206.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (275 aa)
	AIM00207.1	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (543 aa)
	AIM00208.1	Cro/Cl family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (264 aa)
	AIM00209.1	Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (529 aa)
	AIM00210.1	Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (665 aa)
	AIM00357.1	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (255 aa)
	AIM00358.1	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (277 aa)
	AIM00359.1	D-ala-D-ala transporter subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. (310 aa)
	AIM00360.1	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (347 aa)
	AIM00361.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (546 aa)
	AIM00486.1	Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (514 aa)
	AIM00488.1	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (542 aa)
	AIM00489.1	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (272 aa)
	AIM00490.1	Peptide ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (314 aa)
	AIM00538.1	Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (491 aa)
	AIM00539.1	Peptide ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (526 aa)
	AIM00540.1	N-ethylammeline chlorohydrolase; Catalyzes the hydrolytic cleavage of a carbon-halogen bond in N-ethylammeline; Derived by automated computational analysis using gene prediction method: Protein Homology. (496 aa)
	AIM00541.1	Peptide ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (520 aa)
	AIM00542.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (322 aa)
	AIM00543.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (316 aa)
	AIM00545.1	N-ethylammeline chlorohydrolase; Catalyzes the hydrolytic cleavage of a carbon-halogen bond in N-ethylammeline; Derived by automated computational analysis using gene prediction method: Protein Homology. (497 aa)
	AIM00546.1	Peptide ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (327 aa)
	AIM00547.1	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (334 aa)
	AIM00763.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (312 aa)
	AIM00764.1	Nickel ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (283 aa)
	AIM00765.1	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (567 aa)
	AIM00766.1	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. (504 aa)
	AIM00906.1	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (293 aa)
	AIM00907.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (308 aa)
	AIM00908.1	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (332 aa)
	oppD	Oligopeptide transporter ATP-binding component; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (337 aa)
	AIM00910.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (542 aa)

Your Current Organism:

Sinorhizobium meliloti

NCBI taxonomy Id: 382
Other names: ATCC 9930, CCUG 27879, CFBP 5561, DSM 30135, Ensifer meliloti, Ensifer sp. AC50a, Ensifer sp. AC50e, HAMBI 2148, IAM 12611, ICMP 12623, IFO 14782, JCM 20682, LMG 6133, LMG:6133, NBRC 14782, NCAIM B.01520, NRRL L-45, NZP 4027, Rhizobium meliloti, Rhizobium meliloti (megaplasmid pRME41B SYM), Rhizobium meliloti (plasmid pRmeGR4b), Rhizobium meliloti plasmid pRmeGR4b, Rhizobium sp. AC50e, S. meliloti

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AIL97999.1	AIL98000.1	DU99_00800	DU99_00805	Microcin ABC transporter ATP-binding protein; With YejAEF is involved in resistance to microcin C; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.984
AIL97999.1	AIL98002.1	DU99_00800	DU99_00815	Microcin ABC transporter ATP-binding protein; With YejAEF is involved in resistance to microcin C; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.874
AIL97999.1	AIL98558.1	DU99_00800	DU99_03760	Microcin ABC transporter ATP-binding protein; With YejAEF is involved in resistance to microcin C; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	Peptide transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.913
AIL97999.1	AIL99513.1	DU99_00800	DU99_08970	Microcin ABC transporter ATP-binding protein; With YejAEF is involved in resistance to microcin C; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	Bicyclomycin resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.778
AIL97999.1	AIL99820.1	DU99_00800	DU99_10600	Microcin ABC transporter ATP-binding protein; With YejAEF is involved in resistance to microcin C; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	Glutathione ABC transporter permease; With GsiABD is involved in the transport of glutathione into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.408
AIL97999.1	AIL99821.1	DU99_00800	DU99_10605	Microcin ABC transporter ATP-binding protein; With YejAEF is involved in resistance to microcin C; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.938
AIL97999.1	AIM00206.1	DU99_00800	DU99_12635	Microcin ABC transporter ATP-binding protein; With YejAEF is involved in resistance to microcin C; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.867
AIL97999.1	AIM00359.1	DU99_00800	DU99_13440	Microcin ABC transporter ATP-binding protein; With YejAEF is involved in resistance to microcin C; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	D-ala-D-ala transporter subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.914
AIL97999.1	AIM00489.1	DU99_00800	DU99_14105	Microcin ABC transporter ATP-binding protein; With YejAEF is involved in resistance to microcin C; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.927
AIL97999.1	AIM00490.1	DU99_00800	DU99_14110	Microcin ABC transporter ATP-binding protein; With YejAEF is involved in resistance to microcin C; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	Peptide ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.423
AIL97999.1	AIM00543.1	DU99_00800	DU99_14380	Microcin ABC transporter ATP-binding protein; With YejAEF is involved in resistance to microcin C; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.905
AIL97999.1	AIM00764.1	DU99_00800	DU99_15570	Microcin ABC transporter ATP-binding protein; With YejAEF is involved in resistance to microcin C; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	Nickel ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.925
AIL97999.1	AIM00906.1	DU99_00800	DU99_16330	Microcin ABC transporter ATP-binding protein; With YejAEF is involved in resistance to microcin C; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.888
AIL97999.1	AIM00907.1	DU99_00800	DU99_16335	Microcin ABC transporter ATP-binding protein; With YejAEF is involved in resistance to microcin C; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.454
AIL97999.1	yejB	DU99_00800	DU99_00810	Microcin ABC transporter ATP-binding protein; With YejAEF is involved in resistance to microcin C; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	Microcin ABC transporter permease; With YejAEF is involved in resistance to microcin C; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.960
AIL98000.1	AIL97999.1	DU99_00805	DU99_00800	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Microcin ABC transporter ATP-binding protein; With YejAEF is involved in resistance to microcin C; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	0.984
AIL98000.1	AIL98002.1	DU99_00805	DU99_00815	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.897
AIL98000.1	AIL98559.1	DU99_00805	DU99_03770	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.449
AIL98000.1	AIL99513.1	DU99_00805	DU99_08970	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Bicyclomycin resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.818
AIL98000.1	AIL99817.1	DU99_00805	DU99_10585	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	0.693

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