STRINGSTRING
AIL98859.1 AIL98859.1 AIL98860.1 AIL98860.1 AIL99833.1 AIL99833.1 AIL99834.1 AIL99834.1 AIM00007.1 AIM00007.1 AIM00008.1 AIM00008.1 AIM00009.1 AIM00009.1 AIM00010.1 AIM00010.1 AIM00012.1 AIM00012.1 AIM00346.1 AIM00346.1 choW choW proV proV AIM00649.1 AIM00649.1 AIM00650.1 AIM00650.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AIL98859.1ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (332 aa)
AIL98860.1ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (295 aa)
AIL99833.1ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (332 aa)
AIL99834.1Glycine/betaine ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (348 aa)
AIM00007.1Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (33 aa)
AIM00008.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (70 aa)
AIM00009.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (232 aa)
AIM00010.1Amino acid-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (314 aa)
AIM00012.1Signal peptide protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (84 aa)
AIM00346.1Glycine/betaine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (318 aa)
choWABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (281 aa)
proVHemolysin; Derived by automated computational analysis using gene prediction method: Protein Homology. (349 aa)
AIM00649.1Histidine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (344 aa)
AIM00650.1ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (285 aa)
Your Current Organism:
Sinorhizobium meliloti
NCBI taxonomy Id: 382
Other names: ATCC 9930, CCUG 27879, CFBP 5561, DSM 30135, Ensifer meliloti, Ensifer sp. AC50a, Ensifer sp. AC50e, HAMBI 2148, IAM 12611, ICMP 12623, IFO 14782, JCM 20682, LMG 6133, LMG:6133, NBRC 14782, NCAIM B.01520, NRRL L-45, NZP 4027, Rhizobium meliloti, Rhizobium meliloti (megaplasmid pRME41B SYM), Rhizobium meliloti (plasmid pRmeGR4b), Rhizobium meliloti plasmid pRmeGR4b, Rhizobium sp. AC50e, S. meliloti
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