(12 nodes) Bacterial extracellular solute-binding proteins, family 5 Middle network (Sinorhizobium meliloti)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Known Interactions

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Predicted Interactions

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protein homology

Your Input:
	AIL98002.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (619 aa)
	AIM00910.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (542 aa)
	AIM00766.1	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. (504 aa)
	AIM00541.1	Peptide ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (520 aa)
	AIM00539.1	Peptide ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (526 aa)
	AIM00486.1	Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (514 aa)
	AIM00361.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (546 aa)
	AIM00209.1	Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (529 aa)
	AIM00204.1	Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (529 aa)
	AIL99819.1	Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (538 aa)
	AIL99513.1	Bicyclomycin resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (604 aa)
	AIL98556.1	Peptide ABC transporter substrate-binding protein; DppABCDF is involved in the transport of dipeptides; also binds heme and mediates chemotaxis to dipeptides; Derived by automated computational analysis using gene prediction method: Protein Homology. (531 aa)

Your Current Organism:

Sinorhizobium meliloti

NCBI taxonomy Id: 382
Other names: ATCC 9930, CCUG 27879, CFBP 5561, DSM 30135, Ensifer meliloti, Ensifer sp. AC50a, Ensifer sp. AC50e, HAMBI 2148, IAM 12611, ICMP 12623, IFO 14782, JCM 20682, LMG 6133, LMG:6133, NBRC 14782, NCAIM B.01520, NRRL L-45, NZP 4027, Rhizobium meliloti, Rhizobium meliloti (megaplasmid pRME41B SYM), Rhizobium meliloti (plasmid pRmeGR4b), Rhizobium meliloti plasmid pRmeGR4b, Rhizobium sp. AC50e, S. meliloti

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AIL98002.1	AIL98556.1	DU99_00815	DU99_03750	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter substrate-binding protein; DppABCDF is involved in the transport of dipeptides; also binds heme and mediates chemotaxis to dipeptides; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.410
AIL98002.1	AIL99513.1	DU99_00815	DU99_08970	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Bicyclomycin resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.429
AIL98002.1	AIL99819.1	DU99_00815	DU99_10595	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.410
AIL98002.1	AIM00204.1	DU99_00815	DU99_12625	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.410
AIL98002.1	AIM00209.1	DU99_00815	DU99_12650	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.410
AIL98002.1	AIM00361.1	DU99_00815	DU99_13450	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.410
AIL98002.1	AIM00486.1	DU99_00815	DU99_14090	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.410
AIL98002.1	AIM00541.1	DU99_00815	DU99_14370	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.410
AIL98002.1	AIM00766.1	DU99_00815	DU99_15580	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.410
AIL98556.1	AIL98002.1	DU99_03750	DU99_00815	Peptide ABC transporter substrate-binding protein; DppABCDF is involved in the transport of dipeptides; also binds heme and mediates chemotaxis to dipeptides; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.410
AIL98556.1	AIL99513.1	DU99_03750	DU99_08970	Peptide ABC transporter substrate-binding protein; DppABCDF is involved in the transport of dipeptides; also binds heme and mediates chemotaxis to dipeptides; Derived by automated computational analysis using gene prediction method: Protein Homology.	Bicyclomycin resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.410
AIL98556.1	AIL99819.1	DU99_03750	DU99_10595	Peptide ABC transporter substrate-binding protein; DppABCDF is involved in the transport of dipeptides; also binds heme and mediates chemotaxis to dipeptides; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.444
AIL98556.1	AIM00204.1	DU99_03750	DU99_12625	Peptide ABC transporter substrate-binding protein; DppABCDF is involved in the transport of dipeptides; also binds heme and mediates chemotaxis to dipeptides; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.429
AIL98556.1	AIM00209.1	DU99_03750	DU99_12650	Peptide ABC transporter substrate-binding protein; DppABCDF is involved in the transport of dipeptides; also binds heme and mediates chemotaxis to dipeptides; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.427
AIL98556.1	AIM00361.1	DU99_03750	DU99_13450	Peptide ABC transporter substrate-binding protein; DppABCDF is involved in the transport of dipeptides; also binds heme and mediates chemotaxis to dipeptides; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.473
AIL98556.1	AIM00486.1	DU99_03750	DU99_14090	Peptide ABC transporter substrate-binding protein; DppABCDF is involved in the transport of dipeptides; also binds heme and mediates chemotaxis to dipeptides; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.440
AIL98556.1	AIM00766.1	DU99_03750	DU99_15580	Peptide ABC transporter substrate-binding protein; DppABCDF is involved in the transport of dipeptides; also binds heme and mediates chemotaxis to dipeptides; Derived by automated computational analysis using gene prediction method: Protein Homology.	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.465
AIL99513.1	AIL98002.1	DU99_08970	DU99_00815	Bicyclomycin resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.429
AIL99513.1	AIL98556.1	DU99_08970	DU99_03750	Bicyclomycin resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter substrate-binding protein; DppABCDF is involved in the transport of dipeptides; also binds heme and mediates chemotaxis to dipeptides; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.410
AIL99513.1	AIL99819.1	DU99_08970	DU99_10595	Bicyclomycin resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.410

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